Mycobacterium phage Cracklewink
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Detailed Information for Phage Cracklewink
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByClaudia Liu
Year Found2017
Location FoundProvidence, RI USA
Finding InstitutionBrown University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.8268 N, 71.4025 W Map
Discovery NotesPhage was found in a courtyard on Brown University campus.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 2, 2018
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage623
Genome length (bp)76991
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceTGCCGCCCGGTA
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNorthwestern College
Annotation StatusIn GenBank
Plaque NotesVery small plaques up to about 1-1.5 millimeters across.
Number of Genes135
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Cracklewink_1
(ParB-like nuclease domain protein)

Cracklewink_2

Cracklewink_3
(queuine tRNA-ribosyltransferase)

Cracklewink_4

Cracklewink_5
(QueD-like queosine biosynthesis protein)

Cracklewink_6
(QueE-like queosine biosynthesis protein)

Cracklewink_7
(GTP cyclohydrolase I)

Cracklewink_8
(RNaseE)

Cracklewink_9
(terminase)

Cracklewink_10

Cracklewink_11
(portal protein)

Cracklewink_12
(capsid maturation protease)

Cracklewink_13
(major capsid protein)

Cracklewink_14

Cracklewink_15
(head-to-tail adaptor)

Cracklewink_16
(head-to-tail stopper)

Cracklewink_17

Cracklewink_18
(tail terminator)

Cracklewink_19
(major tail protein)

Cracklewink_20
(tail assembly chaperone)

Cracklewink_21
(tail assembly chaperone)

Cracklewink_22
(tape measure protein)

Cracklewink_23
(minor tail protein)

Cracklewink_24
(minor tail protein)

Cracklewink_25
(minor tail protein)

Cracklewink_26

Cracklewink_27
(minor tail protein)

Cracklewink_28
(minor tail protein)

Cracklewink_29

Cracklewink_30

Cracklewink_31

Cracklewink_32
(lysin A, glycosyl hydrolase domain)

Cracklewink_33
(lysin A, protease domain)

Cracklewink_34

Cracklewink_35
(lysin B)

Cracklewink_36
(holin)

Cracklewink_37

Cracklewink_38

Cracklewink_39

Cracklewink_40

Cracklewink_41 — tRNA
(codon recognized: AUG)

Cracklewink_42
(BrnT-like toxin)

Cracklewink_43

Cracklewink_44

Cracklewink_45

Cracklewink_46

Cracklewink_47

Cracklewink_48
(helix-turn-helix DNA binding domain protein)

Cracklewink_49

Cracklewink_50
(tyrosine integrase)

Cracklewink_51
(immunity repressor)

Cracklewink_52
(excise)

Cracklewink_53

Cracklewink_54
(DNA polymerase III subunit)

Cracklewink_55

Cracklewink_56

Cracklewink_57

Cracklewink_58
(WhiB family transcription factor)

Cracklewink_59

Cracklewink_60

Cracklewink_61

Cracklewink_62
(HNH endonuclease)

Cracklewink_63
(RecE-like exonuclease)

Cracklewink_64
(RecT-like ssDNA binding protein)

Cracklewink_65

Cracklewink_66

Cracklewink_67

Cracklewink_68

Cracklewink_69

Cracklewink_70

Cracklewink_71

Cracklewink_72

Cracklewink_73

Cracklewink_74

Cracklewink_75

Cracklewink_76

Cracklewink_77

Cracklewink_78

Cracklewink_79

Cracklewink_80
(ASC-1 transcription coactivator)

Cracklewink_81

Cracklewink_82
(HNH endonuclease)

Cracklewink_83

Cracklewink_84
(helix-turn-helix DNA binding domain protein)

Cracklewink_85

Cracklewink_86

Cracklewink_87

Cracklewink_88

Cracklewink_89
(RuvC-like resolvase)

Cracklewink_90

Cracklewink_91
(metallophosphoesterase)

Cracklewink_92

Cracklewink_93

Cracklewink_94

Cracklewink_95

Cracklewink_96

Cracklewink_97

Cracklewink_98

Cracklewink_99

Cracklewink_100

Cracklewink_101

Cracklewink_102

Cracklewink_103

Cracklewink_104

Cracklewink_105

Cracklewink_106

Cracklewink_107

Cracklewink_108

Cracklewink_109

Cracklewink_110

Cracklewink_111

Cracklewink_112

Cracklewink_113

Cracklewink_114

Cracklewink_115

Cracklewink_116

Cracklewink_117

Cracklewink_118

Cracklewink_119

Cracklewink_120

Cracklewink_121

Cracklewink_122

Cracklewink_123

Cracklewink_124

Cracklewink_125

Cracklewink_126

Cracklewink_127

Cracklewink_128

Cracklewink_129

Cracklewink_130

Cracklewink_131

Cracklewink_132

Cracklewink_133

Cracklewink_134

Cracklewink_135

Cracklewink_136
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK977701
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 54
Pitt Freezer Box Grid# A10
Available Files
GenBank File for PhameratorDownload