| Detailed Information for Phage DelRio |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Haley Davis and Emme Edmondson |
| Year Found | 2017 |
| Location Found | Arkadelphia, AR USA |
| Finding Institution | Ouachita Baptist University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.1768 N, 93.0714 W Map |
| Discovery Notes | We found the phage near the bank of the Caddo River. |
| Naming Notes | We gathered the soil with the phage near a river, so we named the phage Rio, which is river in Spanish. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 6, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 594 |
| Genome length (bp) | 50961 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TGCCGCGGTA |
| GC Content | 67.0% |
| Sequencing Notes | Was sequenced as a deliberately mixed sample along with SketchMex. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DI |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Ouachita Baptist University |
| Annotation Status | In GenBank |
| Plaque Notes | The phage forms slightly cloudy plaques that measure 4 mm in diameter. |
| Number of Genes | 75 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH509446 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
4.5x10^8 pfu/mL |
| Pitt Freezer Box# |
48 |
| Pitt Freezer Box Grid# |
E11 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |