Gordonia phage GrandSlam
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage GrandSlam
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDavid Rainwater
Year Found2017
Location FoundSheridan, AR USA
Finding InstitutionOuachita Baptist University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates34.29583 N, 92.42194 W Map
Discovery NotesFound at the Sheridan Arkansas High School baseball field in the pitching mound dirt
Naming NotesWe named our phage GrandSlam because we found it on a baseball field and a grand slam is a baseball term for when a batter hits a home run with the bases loaded.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 28, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2034
Genome length (bp)50919
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGCCGCGGTA
GC Content67.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDI
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionOuachita Baptist University
Annotation StatusIn GenBank
Plaque NotesOur plaques were relatively cloudy with a bulls-eye shape tending to favor. This seems to be signs of our phage being a temperate phage. Plaque diameter was around 3 millimeters.
Has been Phamerated?Yes
Gene List

Click to View

GrandSlam_1
(HNH endonuclease)

GrandSlam_2

GrandSlam_3

GrandSlam_4

GrandSlam_5
(terminase small subunit)

GrandSlam_6
(terminase large subunit)

GrandSlam_7
(portal protein)

GrandSlam_8
(capsid maturation protease)

GrandSlam_9
(scaffolding protein)

GrandSlam_10
(major capsid protein)

GrandSlam_11

GrandSlam_12
(head-to-tail adaptor)

GrandSlam_13
(head-to-tail adaptor)

GrandSlam_14
(head-to-tail adaptor)

GrandSlam_15

GrandSlam_16
(major tail protein)

GrandSlam_17

GrandSlam_18
(tail assembly chaperone)

GrandSlam_19
(tail assembly chaperone)

GrandSlam_20
(tape measure protein)

GrandSlam_21
(minor tail protein)

GrandSlam_22
(minor tail protein)

GrandSlam_23
(minor tail protein)

GrandSlam_24
(minor tail protein)

GrandSlam_25
(minor tail protein)

GrandSlam_26

GrandSlam_27

GrandSlam_28

GrandSlam_29
(lysin A, protease C39 domain)

GrandSlam_30
(lysin A, glycosyl hydrolase domain)

GrandSlam_31
(holin)

GrandSlam_32

GrandSlam_33

GrandSlam_34
(HicB-like antitoxin)

GrandSlam_35
(HicA-like toxin)

GrandSlam_36

GrandSlam_37

GrandSlam_38

GrandSlam_39
(tyrosine integrase)

GrandSlam_40
(immunity repressor)

GrandSlam_41
(helix-turn-helix DNA binding domain protein)

GrandSlam_42
(helix-turn-helix DNA binding domain protein)

GrandSlam_43

GrandSlam_44

GrandSlam_45

GrandSlam_46

GrandSlam_47
(exonuclease)

GrandSlam_48

GrandSlam_49

GrandSlam_50

GrandSlam_51

GrandSlam_52

GrandSlam_53

GrandSlam_54

GrandSlam_55

GrandSlam_56

GrandSlam_57

GrandSlam_58

GrandSlam_59

GrandSlam_60

GrandSlam_61

GrandSlam_62

GrandSlam_63

GrandSlam_64

GrandSlam_65
(metallophosphoesterase)

GrandSlam_66

GrandSlam_67
(hydrolase)

GrandSlam_68
(methyltransferase)

GrandSlam_69

GrandSlam_70

GrandSlam_71
(DNA primase)

GrandSlam_72
(endonuclease VII)

GrandSlam_73

GrandSlam_74
(MerR-like helix-turn-helix DNA binding domain protein)

GrandSlam_75
(HNH endonuclease)

GrandSlam_76

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK967392
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4x10^9 pfu/ml
Pitt Freezer Box# 48
Pitt Freezer Box Grid# E12
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload