Recently Added Phages

Pepe25 Bundimun Sham4 Rob30 Tomlarah

Recently Modified Phages

Nitro Lizzo Blett Abigail ManAs

Recently Finished Phages

Abigail (EB) Blett (GA) ManAs (EE) Lizzo (CS2) Nitro (AZ)
Gordonia phage Parada
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Parada
Discovery Information
Isolation HostGordonia terrae 3612
Found ByPraise Olatunde
Year Found2016
Location FoundGrand Rapids, MI USA
Finding InstitutionCalvin University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.933611 N, 85.590833 W Map
Discovery Notes-Soil sample obtained from under the squash plants in the Calvin Campus Garden in Sept.​
-Moist, wet dark brown dirt
Naming NotesName comes from the Yoruba Language
Meaning in English is : "renewing"
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 4, 2017
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage539
Genome length (bp)49909
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGCCGCGGTA
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDI
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Wisconsin-River Falls
Annotation StatusIn GenBank
Plaque Notes-Plaques on my spot test were about 9.5mm in diameter​
-Plaques were symmetrical small circles​
-Clear (suggests lytic)​
-Consistent pattern in the different dilutions of the purification procedure​
-When my g.terrae lawn were richer the plaques were slightly larger​
-plaques are about 2 mm in size
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359319
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3.0 x 10^10
Date of SEA Lysate Titering Nov 4, 2016
Pitt Freezer Box# 39
Pitt Freezer Box Grid# A11
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload