Detailed Information for Phage DinoDaryn |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Leon Lin |
Year Found | 2016 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.44256 N, 79.956541 W Map |
Discovery Notes | Found in the potted soil beds in front of Litchfield Towers |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 9, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1416 |
Genome length (bp) | 44936 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | TCCGGGCCGGTA |
GC Content | 66.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CU |
Subcluster | CU1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | small, clear, about 1 mm in diameter |
Morphotype | Siphoviridae |
Number of Genes | 82 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KY471269 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
C8 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |