Detailed Information for Phage Dmitri |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Benjamin Sumner |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 40.4432 N, 79.9527 W Map |
Discovery Notes | It was found just after it had rained, and it was close in proximity to some plants. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 15, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2508 |
Genome length (bp) | 45736 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCCCGCGGTA |
GC Content | 66.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DB |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK937599 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.66 x 10^10 |
Date of SEA Lysate Titering |
Apr 10, 2017 |
Pitt Freezer Box# |
55 |
Pitt Freezer Box Grid# |
E11 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |