Gordonia phage DonkeyMan
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| Detailed Information for Phage DonkeyMan | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Reed Seybolt |
| Year Found | 2021 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.444750 N, 79.952361 W Map |
| Discovery Notes | Found when raining |
| Naming Notes | Randomly thought of, our phage is lysogenic with a bullseye in the middle of it. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 24, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 892 |
| Genome length (bp) | 40111 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCCGGAGGTA |
| GC Content | 67.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DY |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | Saint Leo University |
| Annotation Status | Awaiting_QC |
| Plaque Notes | Hazy on the outside with a dark bullseye in the middle |
| Number of Genes | 59 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewDonkeyMan_1 DonkeyMan_2 DonkeyMan_3 DonkeyMan_4 DonkeyMan_5 DonkeyMan_6 DonkeyMan_7 DonkeyMan_8 DonkeyMan_9 DonkeyMan_10 DonkeyMan_11 DonkeyMan_12 DonkeyMan_13 DonkeyMan_14 DonkeyMan_15 DonkeyMan_16 DonkeyMan_17 DonkeyMan_18 DonkeyMan_19 DonkeyMan_20 DonkeyMan_21 DonkeyMan_22 DonkeyMan_23 DonkeyMan_24 DonkeyMan_25 DonkeyMan_26 DonkeyMan_27 DonkeyMan_28 DonkeyMan_29 DonkeyMan_30 DonkeyMan_31 DonkeyMan_32 DonkeyMan_33 DonkeyMan_34 DonkeyMan_35 DonkeyMan_36 DonkeyMan_37 DonkeyMan_38 DonkeyMan_39 DonkeyMan_40 DonkeyMan_41 DonkeyMan_42 DonkeyMan_43 DonkeyMan_44 DonkeyMan_45 DonkeyMan_46 DonkeyMan_47 DonkeyMan_48 DonkeyMan_49 DonkeyMan_50 DonkeyMan_51 DonkeyMan_52 DonkeyMan_53 DonkeyMan_54 DonkeyMan_55 DonkeyMan_56 DonkeyMan_57 DonkeyMan_58 DonkeyMan_59 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 141 |
| Pitt Freezer Box Grid# | C5 |
| Available Files | |
| Plaque Picture | Download |