| Detailed Information for Phage DrLupo | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Connor Tupper |
| Year Found | 2018 |
| Location Found | Gretna, NE USA |
| Finding Institution | Northwestern College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 41.1765 N, 96.259437 W Map |
| Discovery Notes | Found in the soil of Amanda Everhart's barn. Soil was dry and fine from the top layer. Temperature was between 45-50 degrees F. |
| Naming Notes | DrLupo is a fortnite streamer and is a really funny dude |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 25, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 195 |
| Genome length (bp) | 70030 |
| Character of genome ends | Circularly Permuted |
| GC Content | 57.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | H |
| Subcluster | H2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Northwestern College |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are quite small and somewhat round, but with no specific shape. They are difficult to see to the naked eye due to small size and the hazy grey color of the plaque, somewhat similar to the faint yellow of the bacteria. The margins are irregular but roughly circular. |
| Morphotype | Siphoviridae |
| Number of Genes | 110 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewDrLupo_1 DrLupo_2 DrLupo_3 DrLupo_4 DrLupo_5 DrLupo_6 DrLupo_7 DrLupo_8 DrLupo_9 DrLupo_10 DrLupo_11 DrLupo_12 DrLupo_13 DrLupo_14 DrLupo_15 DrLupo_16 DrLupo_17 DrLupo_18 DrLupo_19 DrLupo_20 DrLupo_21 DrLupo_22 DrLupo_23 DrLupo_24 DrLupo_25 DrLupo_26 DrLupo_27 DrLupo_28 DrLupo_29 DrLupo_30 DrLupo_31 DrLupo_32 DrLupo_33 DrLupo_34 DrLupo_35 DrLupo_36 DrLupo_37 DrLupo_38 DrLupo_39 DrLupo_40 DrLupo_41 DrLupo_42 DrLupo_43 DrLupo_44 DrLupo_45 DrLupo_46 DrLupo_47 DrLupo_48 DrLupo_49 DrLupo_50 DrLupo_51 DrLupo_52 DrLupo_53 DrLupo_54 DrLupo_55 DrLupo_56 DrLupo_57 DrLupo_58 DrLupo_59 DrLupo_60 DrLupo_61 DrLupo_62 DrLupo_63 DrLupo_64 DrLupo_65 DrLupo_66 DrLupo_67 DrLupo_68 DrLupo_69 DrLupo_70 DrLupo_71 DrLupo_72 DrLupo_73 DrLupo_74 DrLupo_75 DrLupo_76 DrLupo_77 DrLupo_78 DrLupo_79 DrLupo_80 DrLupo_81 DrLupo_82 DrLupo_83 DrLupo_84 DrLupo_85 DrLupo_86 DrLupo_87 DrLupo_88 DrLupo_89 DrLupo_90 DrLupo_91 DrLupo_92 DrLupo_93 DrLupo_94 DrLupo_95 DrLupo_96 DrLupo_97 DrLupo_98 DrLupo_99 DrLupo_100 DrLupo_101 DrLupo_102 DrLupo_103 DrLupo_104 DrLupo_105 DrLupo_106 DrLupo_107 DrLupo_108 DrLupo_109 DrLupo_110 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK279909 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 72 |
| Pitt Freezer Box Grid# | H12 |
| Available Files | |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |