Detailed Information for Phage Erik |
Discovery Information |
Isolation Host | Rhodococcus erythropolis RIA 643 |
Found By | Victoria Schneider |
Year Found | 2013 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.446506 N, 79.954011 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 14, 2013 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 97 |
Sanger Finishing Reactions | 15 |
Genome length (bp) | 46429 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGCCGTGAT |
GC Content | 58.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CA |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 66 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH271297 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Ignore |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |