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Mycobacterium phage Erk16
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Detailed Information for Phage Erk16
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEmily R Konrad
Year Found2016
Location FoundOxford, OH USA
Finding InstitutionMiami University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates39.502689 N, 84.732361 W Map
Discovery NotesOxford, OH
Date sample was taken: 9-7-16
clay-like soil containing some organic matter (small pebbles, small pieces of mulch)
taken from approx. 3 cm below surface
Naming Notesinitials, hs grad class
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 28, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage223
Genome length (bp)64877
Character of genome endsCircularly Permuted
GC Content59.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterD
SubclusterD1
Cluster Life CycleLytic
Lysogeny Noteslytic
Other Cluster Members
Annotating InstitutionMiami University
Annotation StatusIn GenBank
Plaque Notesapprox. 2 mm plaque diameter; during initial rounds of purification, plaques had turbid halos; morphology changed from "starburst" margin to nearly perfectly circular
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH316562
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.93 X 10^10
Pitt Freezer Box# 31
Pitt Freezer Box Grid# F8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload