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Mycobacterium phage WaldoWhy
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Detailed Information for Phage WaldoWhy
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJessica Garcia
Year Found2016
Location FoundManhattan, KS USA
Finding InstitutionKansas State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature10°C
GPS Coordinates39.045 N, 96.856 W Map
Discovery NotesThe sample was taken from a flower pot, 2 inches deep. The soil was 50 degrees F. It was moist and dark. The location was in a shaded area in someone's front yard. Junction City, KS
Naming NotesHe was so hard to find. WaldoWhy and I have a love-hate relationship.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage735
Genome length (bp)64529
Character of genome endsCircularly Permuted
GC Content59.7%
Fasta file available?Yes: Download fasta file
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionKansas State University
Annotation StatusIn GenBank
Plaque NotesLytic phage with an average plaque diameter of 1 mm after 24 hours. Rounded edges. Small pinpoint colonies.
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK494102
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.3 x (10^7) pfu/ml
Date of SEA Lysate Titering Dec 6, 2016
Pitt Freezer Box# 35
Pitt Freezer Box Grid# A5
Available Files
GenBank File for PhameratorDownload