Microbacterium phage FreddieHg
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Detailed Information for Phage FreddieHg
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByMatthew Pyle and Emily Laov
Year Found2019
Location FoundPhiladelphia, PA USA
Finding InstitutionUniversity of the Sciences in Philadelphia
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature17°C
GPS Coordinates39.94501 N, 75.20845 W Map
Discovery NotesDepth extracted: 2 cm
Moisture content: Dry
Approximately 2 feet away from a paved path, near a group of Coreopsis flowers, a dried, dead bug was excavated with the soil, extracted from flat ground
Naming NotesGiven in honor of the lead singer, Freddie Mercury, of the band that went viral, Queen
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 20, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage151
Genome length (bp)56100
Character of genome endsCircularly Permuted
GC Content63.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEF
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of the Sciences in Philadelphia
Annotation StatusIn GenBank
Plaque NotesTurbid, bullseye shape, 1.5 mm in diameter
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

FreddieHg_1

FreddieHg_2

FreddieHg_3

FreddieHg_4

FreddieHg_5

FreddieHg_6

FreddieHg_7

FreddieHg_8

FreddieHg_9

FreddieHg_10
(terminase)

FreddieHg_11

FreddieHg_12
(portal protein)

FreddieHg_13
(capsid maturation protease and MuF-like fusion protein)

FreddieHg_14

FreddieHg_15
(scaffolding protein)

FreddieHg_16

FreddieHg_17
(major capsid protein)

FreddieHg_18

FreddieHg_19

FreddieHg_20

FreddieHg_21
(minor capsid protein)

FreddieHg_22

FreddieHg_23

FreddieHg_24

FreddieHg_25
(major tail protein)

FreddieHg_26
(tail assembly chaperone)

FreddieHg_27
(tail assembly chaperone)

FreddieHg_28
(tape measure protein)

FreddieHg_29
(minor tail protein)

FreddieHg_30
(minor tail protein)

FreddieHg_31
(minor tail protein)

FreddieHg_32
(minor tail protein)

FreddieHg_33

FreddieHg_34
(lysin A)

FreddieHg_35

FreddieHg_36

FreddieHg_37

FreddieHg_38

FreddieHg_39

FreddieHg_40
(DNA helicase)

FreddieHg_41

FreddieHg_42

FreddieHg_43
(Cas4 family exonuclease)

FreddieHg_44

FreddieHg_45
(RecA-like DNA recombinase)

FreddieHg_46

FreddieHg_47
(DNA primase)

FreddieHg_48

FreddieHg_49

FreddieHg_50

FreddieHg_51

FreddieHg_52

FreddieHg_53
(ThyX-like thymidylate synthase)

FreddieHg_54

FreddieHg_55
(MazG-like nucleotide pyrophosphohydrolase)

FreddieHg_56

FreddieHg_57
(DnaE-like DNA polymerase III (alpha))

FreddieHg_58
(DnaE-like DNA polymerase III (alpha))

FreddieHg_59

FreddieHg_60

FreddieHg_61

FreddieHg_62

FreddieHg_63

FreddieHg_64

FreddieHg_65

FreddieHg_66

FreddieHg_67

FreddieHg_68

FreddieHg_69

FreddieHg_70

FreddieHg_71

FreddieHg_72

FreddieHg_73

FreddieHg_74
(RuvC-like resolvase)

FreddieHg_75

FreddieHg_76

FreddieHg_77

FreddieHg_78

FreddieHg_79

FreddieHg_80

FreddieHg_81

FreddieHg_82

FreddieHg_83

FreddieHg_84

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT639643
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 6.4 x 10^9 pfu/mL
Pitt Freezer Box# 98
Pitt Freezer Box Grid# C11
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload