Microbacterium phage Hiddenleaf
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Hiddenleaf
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByDaekwon Sequira
Year Found2018
Location FoundGarnet Valley, PA USA
Finding InstitutionNeumann University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates39.853972 N, 75.479417 W Map
Discovery NotesFound in herb garden at the base of a bird bath. Responds well to the sound of R&B and Classical music
Naming NotesThe name came from when the agar was chunky the first time it was plated. But Since chunky was taken I change it to HiddenLeaf. Because the soil was found under a bird bath hidden under the leaves of a chive plant.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1334
Genome length (bp)56082
Character of genome endsCircularly Permuted
GC Content63.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEF
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionNeumann University
Annotation StatusIn GenBank
Plaque NotesPlaque morphology: Small exact size in diameter 2mm, The plaques were small and clear.

Phage morphology: Head: 53.63 nm, Tail length 100 nm.
MorphotypeSiphoviridae
Number of Genes84
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Hiddenleaf_1

Hiddenleaf_2

Hiddenleaf_3

Hiddenleaf_4

Hiddenleaf_5

Hiddenleaf_6

Hiddenleaf_7

Hiddenleaf_8

Hiddenleaf_9

Hiddenleaf_10
(terminase)

Hiddenleaf_11

Hiddenleaf_12
(portal protein)

Hiddenleaf_13
(capsid maturation protease)

Hiddenleaf_14

Hiddenleaf_15

Hiddenleaf_16
(minor capsid protein)

Hiddenleaf_17
(major capsid protein)

Hiddenleaf_18

Hiddenleaf_19

Hiddenleaf_20

Hiddenleaf_21
(minor tail protein)

Hiddenleaf_22

Hiddenleaf_23

Hiddenleaf_24

Hiddenleaf_25
(major tail protein)

Hiddenleaf_26
(tail assembly chaperone)

Hiddenleaf_27
(tail assembly chaperone)

Hiddenleaf_28
(tape measure protein)

Hiddenleaf_29
(minor tail protein)

Hiddenleaf_30
(minor tail protein)

Hiddenleaf_31

Hiddenleaf_32
(minor tail protein)

Hiddenleaf_33

Hiddenleaf_34
(lysin A)

Hiddenleaf_35

Hiddenleaf_36

Hiddenleaf_37

Hiddenleaf_38

Hiddenleaf_39

Hiddenleaf_40
(DNA helicase)

Hiddenleaf_41

Hiddenleaf_42

Hiddenleaf_43
(exonuclease)

Hiddenleaf_44

Hiddenleaf_45
(RecA-like DNA recombinase)

Hiddenleaf_46

Hiddenleaf_47
(DNA primase/helicase)

Hiddenleaf_48

Hiddenleaf_49

Hiddenleaf_50

Hiddenleaf_51

Hiddenleaf_52
(oxidoreductase)

Hiddenleaf_53
(ThyX-like thymidylate synthase)

Hiddenleaf_54

Hiddenleaf_55
(nucleotide pyrophosphohydrolase)

Hiddenleaf_56

Hiddenleaf_57
(DnaE-like DNA polymerase III)

Hiddenleaf_58
(DnaE-like DNA polymerase III)

Hiddenleaf_59

Hiddenleaf_60

Hiddenleaf_61

Hiddenleaf_62

Hiddenleaf_63

Hiddenleaf_64

Hiddenleaf_65

Hiddenleaf_66

Hiddenleaf_67

Hiddenleaf_68

Hiddenleaf_69

Hiddenleaf_70

Hiddenleaf_71

Hiddenleaf_72

Hiddenleaf_73

Hiddenleaf_74
(RuvC-like resolvase)

Hiddenleaf_75

Hiddenleaf_76

Hiddenleaf_77

Hiddenleaf_78

Hiddenleaf_79

Hiddenleaf_80

Hiddenleaf_81

Hiddenleaf_82

Hiddenleaf_83

Hiddenleaf_84

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN497954
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.0*10^9
Pitt Freezer Box# 86
Pitt Freezer Box Grid# H6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload