Detailed Information for Phage Honk | |
Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Megan Ulbrich |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.445472 N, 79.9987 W Map |
Discovery Notes | Phage Honk was isolated from moist soil in the Pittsburgh area. |
Naming Notes | This phage is named honk after geese and the peculiar noises that they make. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 20, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 1282 |
Genome length (bp) | 50154 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAAGCGGCAT |
GC Content | 70.3% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | EH |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
Click to View |
Annotating Institution | University of California, Los Angeles |
Annotation Status | In GenBank |
Plaque Notes | Honk plaques are clear and range in size from <1mm to ~4mm in size. |
Number of Genes | 82 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewHonk_1 Honk_2 Honk_3 Honk_4 Honk_5 Honk_6 Honk_7 Honk_8 Honk_9 Honk_10 Honk_11 Honk_12 Honk_13 Honk_14 Honk_15 Honk_16 Honk_17 Honk_18 Honk_19 Honk_20 Honk_21 Honk_22 Honk_23 Honk_24 Honk_25 Honk_26 Honk_27 Honk_28 Honk_29 Honk_30 Honk_31 Honk_32 Honk_33 Honk_34 Honk_35 Honk_36 Honk_37 Honk_38 Honk_39 Honk_40 Honk_41 Honk_42 Honk_43 Honk_44 Honk_45 Honk_46 Honk_47 Honk_48 Honk_49 Honk_50 Honk_51 Honk_52 Honk_53 Honk_54 Honk_55 Honk_56 Honk_57 Honk_58 Honk_59 Honk_60 Honk_61 Honk_62 Honk_63 Honk_64 Honk_65 Honk_66 Honk_67 Honk_68 Honk_69 Honk_70 Honk_71 Honk_72 Honk_73 Honk_74 Honk_75 Honk_76 Honk_77 Honk_78 Honk_79 Honk_80 Honk_81 Honk_82 |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MW862981 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 6 |
Pitt Freezer Box Grid# | H5 |
Available Files | |
GenBank File for Phamerator | Download |