Detailed Information for Phage Jester | |
Discovery Information | |
Isolation Host | Rhodococcus erythropolis RIA 643 |
Found By | Robbie Tyler Jester, Kristen Laurel Robinson |
Year Found | 2015 |
Location Found | Ouachita Parish, LA USA |
Finding Institution | University of Louisiana at Monroe |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 34°C |
GPS Coordinates | 32.427200 N, 92.223700 W Map |
Discovery Notes | It was discovered in damp soil by the bayou in Robbie Jester's backyard. |
Naming Notes | The phage was named Jester because it was found in one of the founder's backyards. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 26, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 3302 |
Genome length (bp) | 46314 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGCCGTGAT |
GC Content | 58.7% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | CA |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
Click to ViewAlatin Alpacados AngryOrchard AppleCloud Belenaria BobbyDazzler Bonanza Bradshaw Bryce CosmicSans Dinger Erik Espica Gollum Harlequin Hiro Jester Krishelle Lillie Naiad Nancinator Natosaleda Partridge PhailMary Phrankenstein Rasputin RER2 RexFury RGL3 Rhodalysa Shuman StCroix Swann Takoda TWAMP UhSalsa Yogi Yoncess |
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Our plaques were medium sized and cloudy. On one of our plates we had both cloudy and clear plaques. Another group picked from the clear plaques and discovered a separate phage called Harlequin. |
Morphotype | Siphoviridae |
Number of Genes | 65 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewJester_1 Jester_2 Jester_3 Jester_4 — tRNA Jester_5 — tRNA Jester_6 — tRNA Jester_7 Jester_8 Jester_9 Jester_10 Jester_11 Jester_12 Jester_13 Jester_14 Jester_15 Jester_16 Jester_17 Jester_18 Jester_20 Jester_19 Jester_21 Jester_22 Jester_23 Jester_24 Jester_25 Jester_26 Jester_27 Jester_28 Jester_29 Jester_30 Jester_31 Jester_32 Jester_33 Jester_34 Jester_35 Jester_36 Jester_37 Jester_38 Jester_39 Jester_40 Jester_41 Jester_42 Jester_43 Jester_44 Jester_45 Jester_46 Jester_47 Jester_48 Jester_49 Jester_50 Jester_51 Jester_52 Jester_53 Jester_54 Jester_55 Jester_56 Jester_57 Jester_58 Jester_59 Jester_60 Jester_61 Jester_62 Jester_63 Jester_64 Jester_65 Jester_66 Jester_67 Jester_68 |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MF373842 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 22 |
Pitt Freezer Box Grid# | H9 |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |