Streptomyces phage Karp
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Detailed Information for Phage Karp
Discovery Information
Isolation HostStreptomyces viridochromogenes DSM40736
Found ByIsabel Silverman and Annabelle Laughlin
Year Found2019
Location FoundSt. Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature27°C
GPS Coordinates38.6362 N, 90.2913 W Map
Discovery NotesKarp was found in the St. Louis Zoo is Forest Park. The soil artificially-applied soil (not naturally occuring), layered beneath wood chips
The soil was rich and moist with little organic matter.
Naming NotesWe named our phage after our Washington University Student Associate, Leo Karp.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 24, 2020
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage92
Genome length (bp)130557
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length734 bp
GC Content47.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBK
SubclusterBK1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusBeing Annotated (Expected completion by 12/24/2020)
Plaque NotesSmall plaques, with around a 0.75 mm diameter.
They are not perfectly circular, with jagged but crisp edges.
Has been Phamerated?Yes
Gene List

Click to View

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Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload