| Detailed Information for Phage Kubulix |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Adelle Durand |
| Year Found | 2024 |
| Location Found | Atlanta, GA United States of America |
| Finding Institution | Spelman College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 33.744889 N, 84.414278 W Map |
| Discovery Notes | Isolated from very dry, fine soil with a lot of dead organic matter in a grassy area. |
| Naming Notes | Kubulix is derived from the Kalinago name of Dominica (Waitukubuli), which means “tall is her body.” The name is both a nod to my home country and the phage’s morphology as a siphovirus. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 10, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 4035 |
| Genome length (bp) | 68996 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 588 bp |
| GC Content | 65.7% |
| Sequencing Notes | This sample was sequenced as part of a DOGEMS (deliberately mixed) sample. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AP |
| Subcluster | AP2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Spelman College |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques were mostly clear (some appeared turbid) with smooth margins and were 0.36 ± 0.06 mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 125 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PV876919 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
216 |
| Pitt Freezer Box Grid# |
A11 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
