Detailed Information for Phage Lesiram | |
Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Marisel Mangual Menchaca |
Year Found | 2023 |
Location Found | Humacao, PR Puerto Rico |
Finding Institution | Universidad Ana G. Mendez, Gurabo campus |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 25°C |
GPS Coordinates | 18.128454 N, 65.803047 W Map |
Discovery Notes | I took my sample at the front of my house, located at Humacao, Puerto Rico. At the time of taking the sample the soil was wet because it had rained. It was also a little hard. It had some roots and grass since there is a tree planted nearby. Although it was wet, it was also compact. |
Naming Notes | I chose the name Lesiram89023 because it is my name backwards with the year in which I found and worked with the phage. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 23, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2415 |
Genome length (bp) | 39780 |
Character of genome ends | Circularly Permuted |
GC Content | 70.0% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | GF |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Universidad Ana G. Mendez, Gurabo campus |
Annotation Status | In GenBank |
Plaque Notes | My phage plaques are little to medium round without any transparent clear bumps, its growth is quite fast. |
Number of Genes | 71 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewLesiram_1 Lesiram_2 Lesiram_3 Lesiram_4 Lesiram_5 Lesiram_6 Lesiram_7 Lesiram_8 Lesiram_9 Lesiram_10 Lesiram_11 Lesiram_12 Lesiram_13 Lesiram_14 Lesiram_15 Lesiram_16 Lesiram_17 Lesiram_18 Lesiram_19 Lesiram_20 Lesiram_21 Lesiram_22 Lesiram_23 Lesiram_24 Lesiram_25 Lesiram_26 Lesiram_27 Lesiram_28 Lesiram_29 Lesiram_30 Lesiram_31 Lesiram_32 Lesiram_33 Lesiram_34 Lesiram_35 Lesiram_36 Lesiram_37 Lesiram_38 Lesiram_39 Lesiram_40 Lesiram_41 Lesiram_42 Lesiram_43 Lesiram_44 Lesiram_45 Lesiram_46 Lesiram_47 Lesiram_48 Lesiram_49 Lesiram_50 Lesiram_51 Lesiram_52 Lesiram_53 Lesiram_54 Lesiram_55 Lesiram_56 Lesiram_57 Lesiram_58 Lesiram_59 Lesiram_60 Lesiram_61 Lesiram_62 Lesiram_63 Lesiram_64 Lesiram_65 Lesiram_66 Lesiram_67 Lesiram_68 Lesiram_69 Lesiram_70 Lesiram_71 |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978869 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
GenBank File for Phamerator | Download |