Detailed Information for Phage Lozinak |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Leon Lin |
Year Found | 2016 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.436316, -79.955480 Map |
Discovery Notes | Found in the soil bed of 400 mckee place under the porch. Soil was cool and about 75 degrees Fahrenheit, mildly moist. |
Naming Notes | Named after a friend with the last name Lozinak |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 12, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 559 |
Genome length (bp) | 93201 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCGACGCTC |
GC Content | 61.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CQ |
Subcluster | CQ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | small, clear plaques, approx 1.5mm in diameter |
Morphotype | Siphoviridae |
Number of Genes | 179 |
Number of tRNAs | 7 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MF919520 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
C11 |
Available Files |
GenBank File for Phamerator | Download |