Streptomyces phage Microdon
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Detailed Information for Phage Microdon
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found BySteven Caruso
Year Found2016
Location FoundKottayam, India
Finding InstitutionUniversity of Maryland, Baltimore County
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates9.58 N, 76.52 E Map
Discovery NotesIsolated from a donated soil sample collected in Kottayam, India on 3/20/16.
Naming NotesMicro = "small," odon = "tooth. Microdon = small-tooth.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 2, 2018
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage3332
Genome length (bp)53356
Character of genome endsCircularly Permuted
GC Content68.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBH
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Maryland, Baltimore County
Annotation StatusIn GenBank
Plaque NotesSmall, asymetrical 3-4 mm plaques on S. griseus and variable 1-2 and 3-4 mm turbid plaques on S. mirabilis. No visible infection of S. scabiei.
MorphotypeSiphoviridae
Number of Genes79
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Microdon_1

Microdon_2

Microdon_3

Microdon_4

Microdon_5

Microdon_6
(terminase)

Microdon_7
(portal protein)

Microdon_8
(capsid maturation protease)

Microdon_9

Microdon_10

Microdon_11
(DNA binding HU-like domain protein)

Microdon_12

Microdon_13

Microdon_14
(scaffolding protein)

Microdon_15
(major capsid protein)

Microdon_16

Microdon_17

Microdon_18

Microdon_19

Microdon_20

Microdon_21
(major tail protein)

Microdon_22

Microdon_23

Microdon_24
(tape measure protein)

Microdon_25

Microdon_26
(minor tail protein)

Microdon_27

Microdon_28

Microdon_29

Microdon_30

Microdon_31

Microdon_32
(hydrolase)

Microdon_33

Microdon_34
(LysM-like endolysin)

Microdon_35

Microdon_36

Microdon_37

Microdon_38

Microdon_39

Microdon_40

Microdon_41
(helicase)

Microdon_42
(WhiB family transcription factor)

Microdon_43

Microdon_44

Microdon_45
(helix-turn-helix DNA binding domain protein)

Microdon_46
(helix-turn-helix DNA binding domain protein)

Microdon_47

Microdon_48

Microdon_49
(exonuclease)

Microdon_50

Microdon_51

Microdon_52
(RecA-like DNA recombinase)

Microdon_53

Microdon_54
(DNA primase/polymerase)

Microdon_55
(ssDNA binding protein)

Microdon_56

Microdon_57
(HicA-like toxin)

Microdon_58

Microdon_59
(nucleotide pyrophosphohydrolase)

Microdon_60
(DNA polymerase I)

Microdon_61

Microdon_62

Microdon_63

Microdon_64

Microdon_65

Microdon_66

Microdon_67

Microdon_68

Microdon_69
(helix-turn-helix DNA binding domain protein)

Microdon_70

Microdon_71

Microdon_72
(SprT-like protease)

Microdon_73

Microdon_74
(hydrolase)

Microdon_75

Microdon_76

Microdon_77

Microdon_78

Microdon_79

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH825706
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4x10^7 pfu/mL
Pitt Freezer Box# 35
Pitt Freezer Box Grid# A9
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload