Detailed Information for Phage ModicumRichard |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Amandine Lambert and Lorelei Schreiner |
Year Found | 2023 |
Location Found | Yanceyville, NC United States |
Finding Institution | Durham Technical Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 36.37803 N, 79.3664 W Map |
Discovery Notes | sample taken from compost with rabbit litter. About 6 in deep and 37C |
Naming Notes | Inside Joke |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 20, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 61 |
Genome length (bp) | 86777 |
Character of genome ends | Circularly Permuted |
GC Content | 67.6% |
Sequencing Notes | This phage was sequenced as part of a DOGEMS sample. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DZ |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
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Annotating Institution | University of California, Los Angeles |
Annotation Status | Being Annotated (Expected completion by 2/14/2025) |
Plaque Notes | From TEM:
Head diameter: 100.33nm
Tail length: 265.30nm |
Number of Genes | 165 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
175 |
Pitt Freezer Box Grid# |
H7 |
Available Files |
Plaque Picture | Download |