Detailed Information for Phage Nancinator |
Discovery Information |
Isolation Host | Rhodococcus erythropolis RIA 643 |
Found By | Cory Hayes |
Year Found | 2014 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.44642 N, 79.954146 W Map |
Naming Notes | Changed my mother's signature on her text messages to say "Nancinator" after every text she sent out. She's been the Nancinator since |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 28, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1433 |
Genome length (bp) | 45936 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGCCGTGAT |
GC Content | 58.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CA |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 65 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH271306 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
4 |
Pitt Freezer Box Grid# |
C3 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |