Detailed Information for Phage Natosaleda |
Discovery Information |
Isolation Host | Rhodococcus erythropolis RIA 643 |
Found By | Daniel Hansen |
Year Found | 2014 |
Location Found | Boston, MA USA |
Finding Institution | Florida Gulf Coast University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 42.347013 N, 71.134274 W Map |
Discovery Notes | The sample was taken by Makayla Smith in Boston then shipped down to FGCU where work began on isolating a phage. |
Naming Notes | The name comes from the first two letters of all of my siblings because like my siblings, my phage has many personalities. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 18, 2014 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1652 |
Genome length (bp) | 46527 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGCCGTGAT |
GC Content | 58.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CA |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | The typical plaque is lidic and 1.25 mm. |
Morphotype | Siphoviridae |
Number of Genes | 65 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KX550082 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
124 |
Pitt Freezer Box Grid# |
D2 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |