Rhodococcus phage Natosaleda
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Detailed Information for Phage Natosaleda
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Found ByDaniel Hansen
Year Found2014
Location FoundBoston, MA USA
Finding InstitutionFlorida Gulf Coast University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.347013 N, 71.134274 W Map
Discovery NotesThe sample was taken by Makayla Smith in Boston then shipped down to FGCU where work began on isolating a phage.
Naming NotesThe name comes from the first two letters of all of my siblings because like my siblings, my phage has many personalities.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 18, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1652
Genome length (bp)46527
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
GC Content58.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesThe typical plaque is lidic and 1.25 mm.
MorphotypeSiphoviridae
Number of Genes65
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Natosaleda_1

Natosaleda_2

Natosaleda_3

Natosaleda_4 — tRNA
(tRNA-Asn (gtt))

Natosaleda_5 — tRNA

Natosaleda_6 — tRNA
(tRNA-Trp (cca))

Natosaleda_7
(endolysin)

Natosaleda_8
(terminase large subunit)

Natosaleda_9
(portal protein)

Natosaleda_10
(capsid maturation protease)

Natosaleda_11
(scaffolding protein)

Natosaleda_12
(major capsid protein)

Natosaleda_13

Natosaleda_14
(head-to-tail adaptor)

Natosaleda_15
(head-to-tail stopper)

Natosaleda_16

Natosaleda_17
(tail terminator)

Natosaleda_18
(major tail protein)

Natosaleda_19
(tail assembly chaperone)

Natosaleda_20
(tail assembly chaperone)

Natosaleda_21
(tape measure protein)

Natosaleda_22
(minor tail protein)

Natosaleda_23
(minor tail protein)

Natosaleda_24
(minor tail protein)

Natosaleda_25
(holin)

Natosaleda_26

Natosaleda_27
(minor tail protein)

Natosaleda_28

Natosaleda_29
(serine integrase)

Natosaleda_30

Natosaleda_31

Natosaleda_32
(deoxycytidylate deaminase)

Natosaleda_33

Natosaleda_34

Natosaleda_35

Natosaleda_36
(DNA polymerase I)

Natosaleda_37
(helix-turn-helix DNA-binding domain protein)

Natosaleda_38
(ThyX-like thymidylate synthase)

Natosaleda_39

Natosaleda_40
(ribonucleotide reductase)

Natosaleda_41

Natosaleda_42
(DNA binding protein)

Natosaleda_43
(metallophosphoesterase)

Natosaleda_44

Natosaleda_45
(glutaredoxin)

Natosaleda_46

Natosaleda_47
(DNA primase)

Natosaleda_48
(DNA primase)

Natosaleda_49

Natosaleda_50
(endonuclease VII)

Natosaleda_51

Natosaleda_52
(DnaB-like dsDNA helicase)

Natosaleda_53

Natosaleda_54

Natosaleda_55
(Cas4 exonuclease)

Natosaleda_56

Natosaleda_57
(immunity repressor)

Natosaleda_58

Natosaleda_59

Natosaleda_60

Natosaleda_61

Natosaleda_62

Natosaleda_63
(ArdA-like antirestriction protein)

Natosaleda_64

Natosaleda_65

Natosaleda_66

Natosaleda_67

Natosaleda_68

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX550082
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 124
Pitt Freezer Box Grid# D2
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload