| Detailed Information for Phage Norvs |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Sheaah Norval |
| Year Found | 2019 |
| Location Found | Lincoln, NE USA |
| Finding Institution | Doane University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.840394 N, 96.599022 W Map |
| Discovery Notes | The ground was moist and covered with snow. I found my phage in my backyard garden digging under the snow into the ground. |
| Naming Notes | From my last name Norval. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 22, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 127 |
| Genome length (bp) | 92405 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCGACGCTC |
| GC Content | 62.0% |
| Sequencing Notes | When this phage was sequenced, there were about 200 positions where ~20% of the reads showed a SNP compared to the published consensus. This likely means that there was a second, very similar, phage present in about one copy for every four of the "main" phage in the sample. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CQ |
| Subcluster | CQ1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Doane University |
| Annotation Status | In GenBank |
| Number of Genes | 175 |
| Number of tRNAs | 8 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ388552 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
108 |
| Pitt Freezer Box Grid# |
A3 |
| Available Files |
| GenBank File for Phamerator | Download |