Gordonia phage ObLaDi
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Detailed Information for Phage ObLaDi
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByBrianna Speakar, Renee Box, Kiyara Grosz
Year Found2020
Location FoundLincoln, NE United States
Finding InstitutionUniversity of Nebraska-Lincoln
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature29°C
GPS Coordinates40.8022 N, 96.6836 W Map
Discovery NotesThe phage was collected by Brianna Speaker from the surface of a flower bed from the Sunken Gardens located in Lincoln, Nebraska.
Naming NotesThe phage was named in honor of the classic Beatle's song Ob-La-Di, Ob-La-Da.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 16, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage121
Genome length (bp)86776
Character of genome endsCircularly Permuted
GC Content67.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDZ
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of California, Los Angeles
Annotation StatusIn GenBank
Plaque NotesPlaques are round, clear, and of a consistent size. They are slightly larger than the tip of a pen.
MorphotypeSiphoviridae
Number of Genes166
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP297535
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 121
Pitt Freezer Box Grid# A8
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload