Mycobacterium phage PBI1
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| Detailed Information for Phage PBI1 | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Bibb/Lewis/Wadsworth |
| Year Found | 2003 |
| Location Found | Pittsburgh , PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.44422 N, 79.953218 W Map |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2006 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Sanger |
| Sequencer Used | Sanger ABI 3730 |
| Read Type | Paired-end reads |
| Genome length (bp) | 64494 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | D |
| Subcluster | D1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 81 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPBI1_1 PBI1_2 PBI1_3 PBI1_4 PBI1_5 PBI1_6 PBI1_7 PBI1_8 PBI1_9 PBI1_10 PBI1_11 PBI1_12 PBI1_13 PBI1_14 PBI1_15 PBI1_16 PBI1_17 PBI1_18 PBI1_19 PBI1_20 PBI1_21 PBI1_22 PBI1_23 PBI1_24 PBI1_25 PBI1_26 PBI1_27 PBI1_28 PBI1_29 PBI1_30 PBI1_31 PBI1_32 PBI1_33 PBI1_34 PBI1_35 PBI1_36 PBI1_37 PBI1_38 PBI1_39 PBI1_40 PBI1_41 PBI1_42 PBI1_43 PBI1_44 PBI1_45 PBI1_46 PBI1_47 PBI1_48 PBI1_49 PBI1_50 PBI1_51 PBI1_52 PBI1_53 PBI1_54 PBI1_55 PBI1_56 PBI1_57 PBI1_58 PBI1_59 PBI1_60 PBI1_61 PBI1_62 PBI1_63 PBI1_64 PBI1_65 PBI1_66 PBI1_67 PBI1_68 PBI1_69 PBI1_70 PBI1_71 PBI1_72 PBI1_73 PBI1_74 PBI1_75 PBI1_76 PBI1_77 PBI1_78 PBI1_79 PBI1_80 PBI1_81 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | DQ398047 |
| Refseq Number | NC_008198 |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 2 |
| Pitt Freezer Box Grid# | F3 |
| Available Files | |
| Plaque Picture | Download |
| Virtual Digest Picture | Download |
| EM Picture | Download |
