| Detailed Information for Phage Patbob |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Kyra Campbell and Lindsey Holden |
| Year Found | 2023 |
| Location Found | Poughkeepsie, NY United States |
| Finding Institution | Marist College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 41.723239 N, 73.937678 W Map |
| Discovery Notes | Found near the Hudson River
Dry, clay like soil
collected from under small rocks |
| Naming Notes | The Hudson River is an aquatic environment.
Named after Spongebob and Patrick, aquatic characters |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 16, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 587 |
| Genome length (bp) | 194885 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 19426 bp |
| GC Content | 53.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | FC |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Marist College |
| Annotation Status | Overdue (Expected completion by 7/1/2024) |
| Plaque Notes | clear, circular morphology and medium sized plaques |
| Morphotype | Siphoviridae |
| Number of Genes | 300 |
| Number of tRNAs | 31 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
183 |
| Pitt Freezer Box Grid# |
C9 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
