| Detailed Information for Phage Popper | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Audrey Jonas |
| Year Found | 2017 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.4417 N, 79.9512 W Map |
| Discovery Notes | Soil was dark, clay-like. The day was warm and humid. |
| Naming Notes | You could say this name just popped into my head. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 4, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1204 |
| Genome length (bp) | 41822 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | TCCGCCGCGTGA |
| GC Content | 65.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FF |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of Ibadan |
| Annotation Status | In GenBank |
| Plaque Notes | 1.5 mm turbid plaques that have clearer edges and bacterial regrowth in the center after 18 hours of incubation at 27 degrees C |
| Number of Genes | 69 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPopper_1 Popper_2 Popper_3 Popper_4 Popper_5 Popper_6 Popper_7 Popper_8 Popper_9 Popper_10 Popper_11 Popper_12 Popper_13 Popper_14 Popper_15 Popper_16 Popper_17 Popper_18 Popper_19 Popper_20 Popper_21 Popper_22 Popper_23 Popper_24 Popper_25 Popper_26 Popper_27 Popper_28 Popper_29 Popper_30 Popper_31 Popper_32 Popper_33 Popper_34 Popper_35 Popper_36 — tRNA Popper_37 Popper_38 Popper_39 Popper_40 Popper_41 Popper_42 Popper_43 Popper_44 Popper_45 Popper_46 Popper_47 Popper_48 Popper_49 Popper_50 Popper_51 Popper_52 Popper_53 Popper_54 Popper_55 Popper_56 Popper_57 Popper_58 Popper_59 Popper_60 Popper_61 Popper_62 Popper_63 Popper_64 Popper_65 Popper_66 Popper_67 Popper_68 Popper_69 Popper_70 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ274308 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 7 |
| Pitt Freezer Box Grid# | A11 |
| Available Files | |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |