Arthrobacter phage Popper
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Detailed Information for Phage Popper
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByAudrey Jonas
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.4417 N, 79.9512 W Map
Discovery NotesSoil was dark, clay-like. The day was warm and humid.
Naming NotesYou could say this name just popped into my head.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1204
Genome length (bp)41822
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceTCCGCCGCGTGA
GC Content65.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFF
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Ibadan
Annotation StatusIn GenBank
Plaque Notes1.5 mm turbid plaques that have clearer edges and bacterial regrowth in the center after 18 hours of incubation at 27 degrees C
Number of Genes69
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Popper_1

Popper_2
(helix-turn-helix DNA-binding domain protein)

Popper_3
(terminase small subunit)

Popper_4
(terminase large subunit)

Popper_5
(portal protein)

Popper_6
(capsid maturation protease)

Popper_7
(scaffolding protein)

Popper_8
(major capsid protein)

Popper_9

Popper_10
(head-to-tail adaptor)

Popper_11
(head-to-tail stopper)

Popper_12

Popper_13
(tail terminator)

Popper_14
(major tail protein)

Popper_15

Popper_16
(tail assembly chaperone)

Popper_17
(tail assembly chaperone)

Popper_18
(tape measure protein)

Popper_19
(minor tail protein)

Popper_20
(minor tail protein)

Popper_21

Popper_22
(minor tail protein)

Popper_23
(endolysin)

Popper_24
(holin)

Popper_25
(minor tail protein)

Popper_26
(minor tail protein)

Popper_27

Popper_28

Popper_29

Popper_30
(esterase)

Popper_31

Popper_32
(esterase)

Popper_33

Popper_34
(tyrosine integrase)

Popper_35
(immunity repressor)

Popper_36 — tRNA
(tRNA-Arg(tct))

Popper_37
(tyrosine integrase)

Popper_38

Popper_39

Popper_40

Popper_41
(Cro protein)

Popper_42
(excise)

Popper_43

Popper_44

Popper_45

Popper_46

Popper_47
(ParB-like DNA binding protein)

Popper_48

Popper_49

Popper_50

Popper_51

Popper_52
(helix-turn-helix DNA-binding domain protein)

Popper_53

Popper_54
(DNA polymerase III sliding clamp beta)

Popper_55

Popper_56

Popper_57

Popper_58

Popper_59

Popper_60

Popper_61

Popper_62
(helix-turn-helix DNA-binding domain protein)

Popper_63

Popper_64
(HNH endonuclease)

Popper_65
(holliday junction resolvase)

Popper_66

Popper_67

Popper_68

Popper_69

Popper_70
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ274308
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 7
Pitt Freezer Box Grid# A11
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload