Detailed Information for Phage Popper |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Audrey Jonas |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.4417 N, 79.9512 W Map |
Discovery Notes | Soil was dark, clay-like. The day was warm and humid. |
Naming Notes | You could say this name just popped into my head. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1204 |
Genome length (bp) | 41822 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | TCCGCCGCGTGA |
GC Content | 65.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | FF |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Ibadan |
Annotation Status | In GenBank |
Plaque Notes | 1.5 mm turbid plaques that have clearer edges and bacterial regrowth in the center after 18 hours of incubation at 27 degrees C |
Number of Genes | 69 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ274308 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
7 |
Pitt Freezer Box Grid# |
A11 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |