Gordonia phage Pupper
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Detailed Information for Phage Pupper | |
Discovery Information | |
Isolation Host | Gordonia terrae 3612 |
Found By | Justin Antonucci |
Year Found | 2016 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 3°C |
GPS Coordinates | 40.444815 N, 79.953835 W Map |
Discovery Notes | Found underneath light snow in semi frozen soil. |
Naming Notes | Puppers are doggos and doggos are best |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 6, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 818 |
Genome length (bp) | 150830 |
Character of genome ends | Circularly Permuted |
GC Content | 66.1% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | DO |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Lysogeny Notes | none |
Other Cluster Members | |
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Small clear Plaques, generally uniform in size |
Morphotype | Myoviridae |
Number of Genes | 233 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MK977695 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
SEA Lysate Titer | 5x10^9 PFU/mL |
Date of SEA Lysate Titering | Mar 14, 2016 |
Pitt Freezer Box# | 3 |
Pitt Freezer Box Grid# | G1 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |