| Detailed Information for Phage Pupper |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Justin Antonucci |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 3°C |
| GPS Coordinates | 40.444815 N, 79.953835 W Map |
| Discovery Notes | Found underneath light snow in semi frozen soil. |
| Naming Notes | Puppers are doggos and doggos are best |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 6, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 818 |
| Genome length (bp) | 150830 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DO |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Lysogeny Notes | none |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Small clear Plaques, generally uniform in size |
| Morphotype | Myoviridae |
| Number of Genes | 233 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK977695 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
5x10^9 PFU/mL |
| Date of SEA Lysate Titering |
Mar 14, 2016 |
| Pitt Freezer Box# |
3 |
| Pitt Freezer Box Grid# |
G1 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
