Arthrobacter phage Racecar
Racecar Plaque Picture
Racecar EM Picture
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(A. sp. ATCC 21022)
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Detailed Information for Phage Racecar
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByPatrick Rimple
Year Found2017
Location FoundBuffalo, NY USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.93382 N, 78.64562 W Map
Discovery NotesCame from a dirt pile used in landscaping
Naming Notespalindromes are cool and so is my dad which is what made me think to use this name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 11, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage223
Genome length (bp)194177
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length20468 bp
GC Content53.2%
Sequencing NotesAt first, we thought Cluster FC phages had no defined ends and were circularly permuted, but as we sequenced more, it became clear that the genomes had a region of double coverage, which is characteristic of a direct terminal repeat. As with some other phages, the right end of the terminal repeat is well-defined, while the left end is less clear.
Fasta file available?Yes: Download fasta file
Characterization
ClusterFC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members

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Atuin

Bloom

Chilliams

DunneganBoMo

Ellewin

GoldenEssence

KSunshine22

LeoJr

Mimi

Panchaali

Patbob

Phrampa

Racecar

ReginaGlobina

Rockabye

SJReid

Talia1610

WaddleDee
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque Notesclear plaques 1 mm or less in size
MorphotypeSiphoviridae
Number of Genes303
Number of tRNAs31
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Racecar_1

Racecar_2

Racecar_3

Racecar_4

Racecar_5
(ParB-like nuclease domain)

Racecar_6

Racecar_7

Racecar_8

Racecar_9

Racecar_10

Racecar_11

Racecar_12

Racecar_13

Racecar_14

Racecar_15

Racecar_16

Racecar_17

Racecar_18

Racecar_19

Racecar_20

Racecar_21

Racecar_22

Racecar_23

Racecar_24

Racecar_25

Racecar_26

Racecar_27

Racecar_28

Racecar_29

Racecar_30

Racecar_31

Racecar_32

Racecar_33

Racecar_34

Racecar_35

Racecar_36

Racecar_37

Racecar_38

Racecar_39

Racecar_40

Racecar_41

Racecar_42

Racecar_43

Racecar_44

Racecar_45

Racecar_46

Racecar_47

Racecar_48

Racecar_49

Racecar_50

Racecar_51

Racecar_52

Racecar_53

Racecar_54

Racecar_55

Racecar_56

Racecar_57

Racecar_58

Racecar_59

Racecar_60

Racecar_61

Racecar_62

Racecar_63

Racecar_64
(ADP-ribosyltransferase)

Racecar_65

Racecar_66

Racecar_67

Racecar_68

Racecar_69
(phosphoribosyl transferase)

Racecar_70

Racecar_71
(nicotinate ribosyltransferase)

Racecar_72

Racecar_73
(helix-turn-helix DNA binding domain)

Racecar_74

Racecar_75

Racecar_76

Racecar_77
(portal protein)

Racecar_78
(DNA helicase)

Racecar_79

Racecar_80

Racecar_81
(capsid maturation protease)

Racecar_82
(major capsid hexamer protein)

Racecar_83

Racecar_84

Racecar_85
(head-to-tail adaptor)

Racecar_86

Racecar_87

Racecar_88

Racecar_89
(tail assembly chaperone)

Racecar_90

Racecar_91
(tape measure protein)

Racecar_92
(minor tail protein)

Racecar_93
(minor tail protein)

Racecar_94
(minor tail protein)

Racecar_95
(minor tail protein)

Racecar_96

Racecar_97

Racecar_98

Racecar_99

Racecar_100
(DNA polymerase I)

Racecar_101
(RuvC-like resolvase)

Racecar_102
(DNA helicase)

Racecar_103
(ThyX-like thymidylate synthase)

Racecar_104
(Cas4-family exonuclease)

Racecar_105
(RecA-like DNA recombinase)

Racecar_106
(SSB protein)

Racecar_107
(MazG-like nucleotide pyrophosphohydrolase)

Racecar_108

Racecar_109
(NrdH-like glutaredoxin)

Racecar_110
(ribonucleotide reductase)

Racecar_111
(ribonucleotide reductase)

Racecar_112
(ribonucleotide reductase)

Racecar_113

Racecar_114

Racecar_115

Racecar_116 — tRNA
(tRNA-Trp(cca))

Racecar_117 — tRNA
(tRNA-Pro(tgg))

Racecar_118 — tRNA
(tRNA-Gly(tcc))

Racecar_119 — tRNA
(tRNA-Thr(tgt))

Racecar_120 — tRNA
(tRNA-Phe(gaa))

Racecar_121 — tRNA
(tRNA-Gln(ttg))

Racecar_122

Racecar_123 — tRNA
(tRNA-Gln(ctg))

Racecar_124 — tRNA
(tRNA-Ser(tga))

Racecar_125 — tRNA
(tRNA-Ile(gat))

Racecar_126

Racecar_127 — tRNA
(tRNA-Glu(ttc))

Racecar_128 — tRNA
(tRNA-Glu(ctc))

Racecar_129 — tRNA
(tRNA-Ser(tga))

Racecar_130 — tRNA
(tRNA-Val(tac))

Racecar_131 — tRNA
(tRNA-Leu(caa))

Racecar_132 — tRNA
(tRNA-Ile(tat))

Racecar_133

Racecar_134 — tRNA
(tRNA-Arg(acg))

Racecar_135
(Holliday junction resolvase)

Racecar_136

Racecar_137 — tRNA
(tRNA-Leu(gag))

Racecar_138

Racecar_139 — tRNA
(tRNA-Leu(tag))

Racecar_140 — tRNA
(tRNA-Arg(tct))

Racecar_141 — tRNA
(tRNA-Tyr(gta))

Racecar_142 — tRNA
(tRNA-Lys(ctt))

Racecar_143 — tRNA
(tRNA-Lys(ttt))

Racecar_144

Racecar_145

Racecar_146

Racecar_147

Racecar_148

Racecar_149
(endolysin)

Racecar_150
(endolysin, protease domain)

Racecar_151 — tRNA
(tRNA-Met(cat))

Racecar_152

Racecar_153

Racecar_154
(DnaE-like DNA polymerase III (alpha))

Racecar_155

Racecar_156 — tRNA
(tRNA-Met(cat))

Racecar_157 — tRNA
(tRNA-Asn(gtt))

Racecar_158 — tRNA
(tRNA-Ala(tgc))

Racecar_159

Racecar_160 — tRNA
(tRNA-Asp(gtc))

Racecar_161
(RNA ligase)

Racecar_162 — tRNA
(tRNA-His(gtg))

Racecar_163
(UDP-glucose dehydrogenase)

Racecar_164
(helix-turn-helix DNA binding domain)

Racecar_165

Racecar_166

Racecar_167 — tRNA
(tRNA-Arg(cct))

Racecar_168 — tRNA
(tRNA-Thr(ggt))

Racecar_169 — tRNA
(tRNA-Cys(gca))

Racecar_170
(HNH endonuclease)

Racecar_171
(MRE11 double-strand break endo/exonuclease)

Racecar_172

Racecar_173

Racecar_174
(glycosyltransferase)

Racecar_175

Racecar_176

Racecar_177
(glycosyltransferase)

Racecar_178
(glycosyltransferase)

Racecar_179
(nucleotidyl transferase)

Racecar_180

Racecar_181
(RNA ligase)

Racecar_182

Racecar_183
(polynucleotide kinase)

Racecar_184

Racecar_185
(tRNA nucleotidyltransferase)

Racecar_186
(RecA-like DNA recombinase)

Racecar_187

Racecar_188

Racecar_189
(minor tail protein)

Racecar_190

Racecar_191
(Nucleotidyl transferase)

Racecar_192

Racecar_193
(WhiB family transcription factor)

Racecar_194
(DNA helicase)

Racecar_195
(DNA primase)

Racecar_196

Racecar_197

Racecar_198
(HNH endonuclease)

Racecar_199

Racecar_200
(DNA helicase)

Racecar_201

Racecar_202

Racecar_203

Racecar_204

Racecar_205

Racecar_206

Racecar_207

Racecar_208

Racecar_209
(terminase)

Racecar_210

Racecar_211

Racecar_212

Racecar_213

Racecar_214

Racecar_215
(SprT-like protease)

Racecar_216

Racecar_217

Racecar_218

Racecar_219

Racecar_220

Racecar_221

Racecar_222

Racecar_223

Racecar_224

Racecar_225

Racecar_226

Racecar_227

Racecar_228

Racecar_229

Racecar_230

Racecar_231

Racecar_232

Racecar_233

Racecar_234

Racecar_235

Racecar_236

Racecar_237

Racecar_238

Racecar_239

Racecar_240

Racecar_241

Racecar_242

Racecar_243

Racecar_244

Racecar_245

Racecar_246

Racecar_247

Racecar_248

Racecar_249

Racecar_250

Racecar_251

Racecar_252

Racecar_253
(glycoside hydrolase)

Racecar_254

Racecar_255

Racecar_256

Racecar_257

Racecar_258

Racecar_259

Racecar_260

Racecar_261

Racecar_262

Racecar_263

Racecar_264

Racecar_265

Racecar_266

Racecar_267

Racecar_268

Racecar_269

Racecar_270

Racecar_271

Racecar_272

Racecar_273

Racecar_274

Racecar_275

Racecar_276
(helix-turn-helix DNA binding domain)

Racecar_277

Racecar_278

Racecar_279

Racecar_280

Racecar_281

Racecar_282

Racecar_283

Racecar_284

Racecar_285

Racecar_286

Racecar_287

Racecar_288

Racecar_289

Racecar_290

Racecar_291

Racecar_292

Racecar_293

Racecar_294

Racecar_295

Racecar_296

Racecar_297

Racecar_298

Racecar_299

Racecar_300

Racecar_301

Racecar_302

Racecar_303

Racecar_304

Racecar_305

Racecar_306

Racecar_307

Racecar_308

Racecar_309

Racecar_310

Racecar_311

Racecar_312

Racecar_313

Racecar_314

Racecar_315

Racecar_316

Racecar_317

Racecar_318

Racecar_319

Racecar_320

Racecar_321

Racecar_322

Racecar_323

Racecar_324

Racecar_325

Racecar_326

Racecar_327

Racecar_328

Racecar_329

Racecar_330

Racecar_331

Racecar_332

Racecar_333

Racecar_334
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234206
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 6
Pitt Freezer Box Grid# C8
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload