Arthrobacter phage RadFad
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Detailed Information for Phage RadFad
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByJasmine Addae
Year Found2021
Location FoundFrostburg, MD United States
Finding InstitutionFrostburg State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature21°C
GPS Coordinates39.652896 N, 78.931068 W Map
Discovery NotesDiscovered by the Lowndes Parking lot on the FSU campus.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage984
Genome length (bp)52737
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGTGA
GC Content62.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionFrostburg State University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes100
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

RadFad_1
(terminase small subunit)

RadFad_2
(terminase large subunit, ATPase domain)

RadFad_3
(terminase large subunit, nuclease domain)

RadFad_4
(portal protein)

RadFad_5

RadFad_6
(scaffolding protein)

RadFad_7
(LamD-like capsid decoration protein)

RadFad_8
(major capsid protein)

RadFad_9

RadFad_10
(head-to-tail adaptor)

RadFad_11
(head-to-tail stopper)

RadFad_12

RadFad_13
(tail terminator)

RadFad_14

RadFad_15
(major tail protein)

RadFad_16
(tail assembly chaperone)

RadFad_17
(tail assembly chaperone)

RadFad_18

RadFad_19
(tape measure protein)

RadFad_20
(minor tail protein)

RadFad_21
(minor tail protein)

RadFad_22
(minor tail protein)

RadFad_23

RadFad_24

RadFad_25

RadFad_26

RadFad_27
(endolysin)

RadFad_28

RadFad_29

RadFad_30

RadFad_31

RadFad_32
(esterase)

RadFad_33

RadFad_34
(esterase)

RadFad_35

RadFad_36
(tyrosine recombinase)

RadFad_37

RadFad_38
(helix-turn-helix DNA binding domain protein)

RadFad_39
(HNH endonuclease)

RadFad_40
(tyrosine recombinase)

RadFad_41

RadFad_42

RadFad_43

RadFad_44

RadFad_45

RadFad_46

RadFad_47

RadFad_48

RadFad_49

RadFad_50

RadFad_51
(nucleotidyl transferase)

RadFad_52

RadFad_53

RadFad_54
(helix-turn-helix DNA binding domain protein)

RadFad_55
(helix-turn-helix DNA binding domain protein)

RadFad_56
(helix-turn-helix DNA binding domain protein)

RadFad_57
(HNH endonuclease)

RadFad_58
(winged helix-turn-helix DNA binding domain protein)

RadFad_59

RadFad_60
(DNA binding domain protein)

RadFad_61

RadFad_62

RadFad_63

RadFad_64

RadFad_65

RadFad_66

RadFad_67

RadFad_68

RadFad_69
(helix-turn-helix DNA binding domain protein)

RadFad_70

RadFad_71

RadFad_72

RadFad_73
(Cas4 family exonuclease)

RadFad_74

RadFad_75

RadFad_76
(ssDNA binding protein)

RadFad_77
(NrdH-like glutaredoxin)

RadFad_78
(phosphatase)

RadFad_79

RadFad_80
(DNA helicase/methyltransferase)

RadFad_81
(helix-turn-helix DNA binding domain protein)

RadFad_82
(DNA polymerase III sliding clamp beta)

RadFad_83

RadFad_84
(DNA methyltransferase)

RadFad_85
(DNA binding domain protein)

RadFad_86

RadFad_87

RadFad_88

RadFad_89
(MazG-like nucleotide pyrophosphohydrolase)

RadFad_90

RadFad_91
(RusA-like resolvase)

RadFad_92

RadFad_93

RadFad_94

RadFad_95

RadFad_96
(winged helix-turn-helix DNA binding domain protein)

RadFad_97

RadFad_98

RadFad_99

RadFad_100
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP434442
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 139
Pitt Freezer Box Grid# A8
Available Files
Restriction Digest PictureDownload
GenBank File for PhameratorDownload