Arthrobacter phage Raphaella
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Detailed Information for Phage Raphaella
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByHannah Alapati
Year Found2023
Location FoundSpringfield, MO United States
Finding InstitutionEvangel University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature20°C
GPS Coordinates37.26409 N, 93.24684 W Map
Naming NotesRaphaella is the female derivative of the name Rafael which means healed by God or God heals.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1701
Genome length (bp)51692
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGTGA
GC Content62.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionEvangel University
Annotation StatusIn GenBank
Number of Genes95
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Raphaella_1
(terminase small subunit)

Raphaella_2
(terminase large subunit ATPase domain)

Raphaella_3
(terminase large subunit nuclease domain)

Raphaella_4
(portal protein)

Raphaella_5
(LamD-like capsid decoration protein)

Raphaella_6
(scaffolding protein)

Raphaella_7
(capsid decoration protein)

Raphaella_8
(major capsid protein)

Raphaella_9

Raphaella_10
(head-to-tail adaptor)

Raphaella_11

Raphaella_12

Raphaella_13

Raphaella_14

Raphaella_15
(major tail protein)

Raphaella_16
(tail assembly chaperone)

Raphaella_17
(tail assembly chaperone)

Raphaella_18

Raphaella_19
(tape measure protein)

Raphaella_20
(minor tail protein)

Raphaella_21
(minor tail protein)

Raphaella_22
(minor tail protein)

Raphaella_23
(minor tail protein)

Raphaella_24

Raphaella_25

Raphaella_26

Raphaella_27
(endolysin)

Raphaella_28

Raphaella_29

Raphaella_30

Raphaella_31

Raphaella_32
(hydrolase)

Raphaella_33

Raphaella_34
(esterase)

Raphaella_35

Raphaella_36
(tyrosine integrase)

Raphaella_37

Raphaella_38

Raphaella_39
(helix-turn-helix DNA binding domain)

Raphaella_40
(tyrosine integrase)

Raphaella_41

Raphaella_42

Raphaella_43

Raphaella_44

Raphaella_45

Raphaella_46

Raphaella_47

Raphaella_48

Raphaella_49

Raphaella_50
(peptidase)

Raphaella_51
(helix-turn-helix DNA binding domain)

Raphaella_52
(helix-turn-helix DNA binding domain)

Raphaella_53
(helix-turn-helix DNA binding domain)

Raphaella_54

Raphaella_55
(helix-turn-helix DNA binding domain)

Raphaella_56

Raphaella_57

Raphaella_58

Raphaella_59

Raphaella_60

Raphaella_61

Raphaella_62

Raphaella_63

Raphaella_64

Raphaella_65

Raphaella_66

Raphaella_67

Raphaella_68
(exonuclease)

Raphaella_69

Raphaella_70

Raphaella_71
(SSB protein)

Raphaella_72

Raphaella_73

Raphaella_74
(NrdH-like glutaredoxin)

Raphaella_75

Raphaella_76
(DNA helicase/methylase)

Raphaella_77
(helix-turn-helix DNA binding domain)

Raphaella_78
(DNA polymerase III sliding clamp beta)

Raphaella_79

Raphaella_80
(DNA methylase)

Raphaella_81

Raphaella_82

Raphaella_83

Raphaella_84
(MazG-like nucleotide pyrophosphohydrolase)

Raphaella_85

Raphaella_86
(RusA-like resolvase)

Raphaella_87

Raphaella_88

Raphaella_89

Raphaella_90

Raphaella_91
(helix-turn-helix DNA binding domain)

Raphaella_92 — tRNA
(tRNA-Gly(ccc))

Raphaella_93

Raphaella_94

Raphaella_95
(metalloprotease)

Raphaella_96
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP978783
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 183
Pitt Freezer Box Grid# G3
Available Files
GenBank File for PhameratorDownload