Detailed Information for Phage RayTheFireFly |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Reena A., Sydney L., Lisa S., Arpitha U. |
Year Found | 2020 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.4443 N, 79.9532 W Map |
Discovery Notes | Found by Reena Agarwal, Sydney Lennon, Lisa Sipe, Arpitha Udupa; Soil from University of Pittsburgh Cathedral Lawn |
Naming Notes | Named after the firefly Ray or Raymond from the Disney movie "The Princess and the Frog", one of our favorite characters |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 28, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 425 |
Genome length (bp) | 45754 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCCCGCGGTA |
GC Content | 66.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DB |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Lysogeny Notes | Halo morphology, but mesas formed on spot titer experiment. |
Other Cluster Members |
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Annotating Institution | SUNY Old Westbury |
Annotation Status | In GenBank |
Plaque Notes | Halo morphology, appearing as a dark opaque small circular clearing within a larger more cloudy circular clearing |
Morphotype | Siphoviridae |
Number of Genes | 73 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR725489 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
126 |
Pitt Freezer Box Grid# |
B9 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |