| Detailed Information for Phage Reyja | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Duplicates of this Phage | Nittany |
| Found By | Shumeng Yang |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.443232 N, 79.95149 W Map |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 9, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2021 |
| Genome length (bp) | 41500 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCCGGAGGTA |
| GC Content | 67.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DY |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Lysogeny Notes | Reyja is a temperate phage. |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Reyja produces small, clear plaques with undefined edges |
| Morphotype | Siphoviridae |
| Number of Genes | 65 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewReyja_1 Reyja_2 Reyja_3 Reyja_4 Reyja_5 Reyja_6 Reyja_7 Reyja_8 Reyja_9 Reyja_10 Reyja_11 Reyja_12 Reyja_13 Reyja_14 Reyja_15 Reyja_16 Reyja_17 Reyja_18 Reyja_19 Reyja_20 Reyja_21 Reyja_22 Reyja_23 Reyja_24 Reyja_25 Reyja_26 Reyja_27 Reyja_28 Reyja_29 Reyja_30 Reyja_31 Reyja_32 Reyja_33 Reyja_34 Reyja_35 Reyja_36 Reyja_37 Reyja_38 Reyja_39 Reyja_40 Reyja_41 Reyja_42 Reyja_43 Reyja_44 Reyja_45 Reyja_46 Reyja_47 Reyja_48 Reyja_49 Reyja_50 Reyja_51 Reyja_52 Reyja_53 Reyja_54 Reyja_55 Reyja_56 Reyja_57 Reyja_58 Reyja_59 Reyja_60 Reyja_61 Reyja_62 Reyja_63 Reyja_64 Reyja_65 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK814759 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 4.6666667 * 10^10 pfu/mL |
| Pitt Freezer Box# | 42 |
| Pitt Freezer Box Grid# | G6 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
