| Detailed Information for Phage Rings | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Michelle Cordero |
| Year Found | 2014 |
| Location Found | Radnor, PA USA |
| Finding Institution | Cabrini University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.050927 N, 75.378327 W Map |
| Discovery Notes | The soil that produced this phage came from a community mulch pile near the Fenimore Woods. Presumably the soil was rich with organic matter perhaps increasing the chances of finding a phage. Please note that phage lysate was made with glycerol for archiving purposes. |
| Naming Notes | Named Rings because the phage makes ring-shaped plaques. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 16, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 2717 |
| Genome length (bp) | 59167 |
| Character of genome ends | Direct Terminal Repeat |
| GC Content | 53.0% |
| Sequencing Notes | Terminal repeat is ~1588bp. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques show a ring-like formation in the center. |
| Morphotype | Siphoviridae |
| Number of Genes | 87 |
| Number of tRNAs | 6 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewRings_1 Rings_2 Rings_3 Rings_4 Rings_5 Rings_6 Rings_7 Rings_8 Rings_9 Rings_10 Rings_11 Rings_12 — tRNA Rings_13 — tRNA Rings_14 — tRNA Rings_15 — tRNA Rings_16 Rings_17 Rings_18 Rings_19 Rings_20 Rings_21 Rings_22 Rings_23 Rings_24 Rings_25 Rings_26 Rings_27 Rings_28 Rings_29 Rings_30 Rings_31 Rings_32 Rings_33 Rings_34 Rings_35 Rings_36 Rings_37 Rings_38 Rings_39 Rings_40 Rings_41 Rings_42 Rings_43 Rings_44 Rings_45 Rings_46 Rings_47 Rings_48 Rings_49 Rings_50 Rings_51 Rings_52 Rings_53 Rings_54 Rings_55 Rings_56 Rings_57 Rings_58 — tRNA Rings_59 — tRNA Rings_60 Rings_61 Rings_62 Rings_63 Rings_64 Rings_65 Rings_66 Rings_67 Rings_68 Rings_69 Rings_70 Rings_71 Rings_72 Rings_73 Rings_74 Rings_75 Rings_76 Rings_77 Rings_78 Rings_79 Rings_80 Rings_81 Rings_82 Rings_83 Rings_84 Rings_85 Rings_86 Rings_87 Rings_88 Rings_89 Rings_90 Rings_91 Rings_92 Rings_93 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU160663 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 149 |
| Pitt Freezer Box Grid# | B2 |
| Available Files | |
| EM Picture | Download |
| Final DNAMaster File | Download |