Gordonia phage ScarletRaider
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Detailed Information for Phage ScarletRaider
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByChase Drucker
Year Found2023
Location FoundLubbock, TX United States
Finding InstitutionTexas Tech University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates33.59022 N, 101.86471 W Map
Discovery NotesG. rubripertincta strain not specified when shipped to us.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage731
Genome length (bp)92813
Character of genome endsCircularly Permuted
GC Content60.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDQ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionTexas Tech University
Annotation StatusIn GenBank
Number of Genes127
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

ScarletRaider_1

ScarletRaider_2

ScarletRaider_3

ScarletRaider_4

ScarletRaider_5

ScarletRaider_6

ScarletRaider_7

ScarletRaider_8

ScarletRaider_9

ScarletRaider_10

ScarletRaider_11

ScarletRaider_12

ScarletRaider_13

ScarletRaider_14
(terminase)

ScarletRaider_15

ScarletRaider_16

ScarletRaider_17

ScarletRaider_18

ScarletRaider_19

ScarletRaider_20

ScarletRaider_21

ScarletRaider_22
(portal protein)

ScarletRaider_23

ScarletRaider_24
(RNA ligase)

ScarletRaider_25
(VIP2-like ADP-ribosyltransferase toxin)

ScarletRaider_26

ScarletRaider_27

ScarletRaider_28

ScarletRaider_29
(minor tail protein)

ScarletRaider_30
(lysin B)

ScarletRaider_31
(minor tail protein)

ScarletRaider_32

ScarletRaider_33
(capsid maturation protease)

ScarletRaider_34
(major capsid protein)

ScarletRaider_35

ScarletRaider_36

ScarletRaider_37

ScarletRaider_38

ScarletRaider_39

ScarletRaider_40
(head-to-tail adaptor)

ScarletRaider_41

ScarletRaider_42
(tail terminator)

ScarletRaider_43

ScarletRaider_44
(tail sheath protein)

ScarletRaider_45
(tail tube protein)

ScarletRaider_46
(tail assembly chaperone)

ScarletRaider_47
(tail assembly chaperone)

ScarletRaider_48
(tape measure protein)

ScarletRaider_49
(LysM-like peptidoglycan binding protein)

ScarletRaider_50
(minor tail protein)

ScarletRaider_51
(minor tail protein)

ScarletRaider_52

ScarletRaider_53

ScarletRaider_54
(baseplate wedge protein)

ScarletRaider_55
(baseplate J protein)

ScarletRaider_56

ScarletRaider_57

ScarletRaider_58

ScarletRaider_59
(lysin A)

ScarletRaider_60

ScarletRaider_61

ScarletRaider_62

ScarletRaider_63

ScarletRaider_64
(DNA primase)

ScarletRaider_65
(DnaB-like dsDNA helicase)

ScarletRaider_66

ScarletRaider_67

ScarletRaider_68

ScarletRaider_69

ScarletRaider_70

ScarletRaider_71

ScarletRaider_72
(AAA-ATPase)

ScarletRaider_73
(CobT-like cobalamin biosynthesis protein)

ScarletRaider_74

ScarletRaider_75

ScarletRaider_76

ScarletRaider_77

ScarletRaider_78

ScarletRaider_79

ScarletRaider_80

ScarletRaider_81

ScarletRaider_82

ScarletRaider_83

ScarletRaider_84

ScarletRaider_85

ScarletRaider_86

ScarletRaider_87
(helix-turn-helix DNA binding domain)

ScarletRaider_88

ScarletRaider_89
(SSB protein)

ScarletRaider_90

ScarletRaider_91

ScarletRaider_92

ScarletRaider_93

ScarletRaider_94

ScarletRaider_95

ScarletRaider_96

ScarletRaider_97

ScarletRaider_98

ScarletRaider_99
(DnaE-like DNA polymerase III (alpha))

ScarletRaider_100

ScarletRaider_101

ScarletRaider_102

ScarletRaider_103

ScarletRaider_104
(RecA-like DNA recombinase)

ScarletRaider_105

ScarletRaider_106

ScarletRaider_107

ScarletRaider_108

ScarletRaider_109
(Cas4 exonuclease)

ScarletRaider_110

ScarletRaider_111

ScarletRaider_112

ScarletRaider_113
(RuvC-like resolvase)

ScarletRaider_114
(ParB-like nuclease domain)

ScarletRaider_115

ScarletRaider_116

ScarletRaider_117

ScarletRaider_118

ScarletRaider_119

ScarletRaider_120

ScarletRaider_121

ScarletRaider_122

ScarletRaider_123

ScarletRaider_124

ScarletRaider_125

ScarletRaider_126

ScarletRaider_127
(endonuclease VII)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ184837
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator CJDS1ER
Pitt Freezer Box# 170
Pitt Freezer Box Grid# A11
Available Files
GenBank File for PhameratorDownload