Detailed Information for Phage Schmidt |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Former names | Shmitty |
Found By | Sydney Garcia and Stassi Henry |
Year Found | 2017 |
Location Found | Reno, NV USA |
Finding Institution | Truckee Meadows Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 43.638719 N, 116.241351 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 25, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1167 |
Genome length (bp) | 43099 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | TCCGGCCGGTT |
GC Content | 65.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CU |
Subcluster | CU4 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Truckee Meadows Community College |
Annotation Status | In GenBank |
Plaque Notes | Bullseye plaques |
Morphotype | Siphoviridae |
Number of Genes | 76 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH651189 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
2.5E9 |
Pitt Freezer Box# |
87 |
Pitt Freezer Box Grid# |
F5 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |