Microbacterium phage Snakehole
Add or modify phage thumbnail images to appear at the top of this page.
Know something about this phage that we don't? Modify its data.
| Detailed Information for Phage Snakehole | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Mia Morgan |
| Year Found | 2023 |
| Location Found | New Haven, CT United States of America |
| Finding Institution | Southern Connecticut State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 41.33527 N, 72.94194 W Map |
| Discovery Notes | The phage was obtained from a soil sample. The temperature that day was very hot, coming in at about 81°F. Nonetheless, the sample was collected in the shade. The soil was damp, and looked lively and rich in color. It was collected about 1 in deep into the soil, and that was the first soil sample collected, |
| Naming Notes | The name of this phage came from its discovery site. The soil collection came from an animal burrow, which was likely a snake hole so, that is where the name derives from |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Paired-end reads |
| Read Length | 300 bp |
| Approximate Shotgun Coverage | 15298 |
| Genome length (bp) | 56035 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EF |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Southern Connecticut State University |
| Annotation Status | Overdue (Expected completion by 4/1/2025) |
| Number of Genes | 83 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| SEA Lysate Titer | 8.6e9 |
| Available Files | |
| Plaque Picture | Download |
