Arthrobacter phage Talia1610
Locally BLAST this genome
Run GeneMarkS
Run GeneMark
(A. sp. ATCC 21022)
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Talia1610
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByTangi Smith
Year Found2022
Location FoundEmmitsburg, MD United States
Finding InstitutionMount St. Mary’s University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates39.68049 N, 77.35485 W Map
Discovery NotesThis phage was isolated in soil and twigs under a tree. Therefore, the area was
shaded and the soil was dry. I got it from about 6cm deep of soil.
Naming NotesNamed after my name and my friend Lia, also our favorite numbers are included.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage661
Genome length (bp)194358
Character of genome endsCircularly Permuted
Direct Terminal Repeat Length19886 bp
End Determination NotesAt first, we thought Cluster FC phages had no defined ends and were circularly permuted, but as we sequenced more, it became clear that the genomes had a region of double coverage, which is characteristic of a direct terminal repeat. As with some other phages, the right end of the terminal repeat is well-defined, while the left end is less clear.
GC Content53.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members

Click to View

Atuin

Bloom

Chilliams

DunneganBoMo

LeoJr

Mimi

Patbob

Phrampa

Racecar

SJReid

Talia1610

WaddleDee
Annotating InstitutionMount St. Mary’s University
Annotation StatusIn GenBank
Plaque NotesThe plaques formed are all tiny, approximately 1mm in diameter. They are clear.
MorphotypeSiphoviridae
Number of Genes297
Number of tRNAs33
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Talia1610_1

Talia1610_2

Talia1610_3

Talia1610_4

Talia1610_5
(ParB-like nuclease domain)

Talia1610_6

Talia1610_7

Talia1610_8

Talia1610_9

Talia1610_10

Talia1610_11

Talia1610_12

Talia1610_13

Talia1610_14

Talia1610_15

Talia1610_16

Talia1610_17

Talia1610_18

Talia1610_19

Talia1610_20

Talia1610_21

Talia1610_22

Talia1610_23

Talia1610_24

Talia1610_25

Talia1610_26

Talia1610_27

Talia1610_28

Talia1610_29

Talia1610_30

Talia1610_31

Talia1610_32

Talia1610_33

Talia1610_34

Talia1610_35

Talia1610_36

Talia1610_37

Talia1610_38

Talia1610_39

Talia1610_40

Talia1610_41

Talia1610_42

Talia1610_43

Talia1610_44

Talia1610_45

Talia1610_46

Talia1610_47

Talia1610_48

Talia1610_49

Talia1610_50

Talia1610_51

Talia1610_52

Talia1610_53

Talia1610_54

Talia1610_55

Talia1610_56

Talia1610_57

Talia1610_58

Talia1610_59

Talia1610_60

Talia1610_61

Talia1610_62

Talia1610_63
(ADP-ribosyltransferase)

Talia1610_64

Talia1610_65

Talia1610_66

Talia1610_67

Talia1610_68
(phosphoribosyltransferase)

Talia1610_69

Talia1610_70
(nicotinate ribosyltransferase)

Talia1610_71

Talia1610_72
(helix-turn-helix DNA binding domain)

Talia1610_73

Talia1610_74

Talia1610_75

Talia1610_76
(portal protein)

Talia1610_77
(helicase)

Talia1610_78

Talia1610_79

Talia1610_80
(capsid maturation protease)

Talia1610_81
(major capsid hexamer protein)

Talia1610_82

Talia1610_83

Talia1610_84
(head-to-tail adaptor)

Talia1610_85

Talia1610_86

Talia1610_87

Talia1610_88
(tail assembly chaperone)

Talia1610_89

Talia1610_90
(tape measure protein)

Talia1610_91
(minor tail protein)

Talia1610_92

Talia1610_93
(minor tail protein)

Talia1610_94

Talia1610_95

Talia1610_96

Talia1610_97

Talia1610_98

Talia1610_99
(DNA polymerase I)

Talia1610_100
(RuvC-like resolvase)

Talia1610_101
(DNA helicase)

Talia1610_102
(ThyX-like thymidylate synthase)

Talia1610_103
(Cas4 family exonuclease)

Talia1610_104
(RecA-like DNA recombinase)

Talia1610_105

Talia1610_106
(MazG-like nucleotide pyrophosphohydrolase)

Talia1610_107

Talia1610_108
(NrdH-like glutaredoxin)

Talia1610_109
(NrdI-like flavodoxin)

Talia1610_110
(ribonucleotide reductase)

Talia1610_111
(G-I-Y Y-I-G endonuclease)

Talia1610_112
(ribonucleotide reductase)

Talia1610_113

Talia1610_114

Talia1610_115 — tRNA
(tRNA-Trp(cca))

Talia1610_116 — tRNA
(tRNA-Pro(tgg))

Talia1610_117 — tRNA
(tRNA-Gly(tcc))

Talia1610_118 — tRNA
(tRNA-Thr(tgt))

Talia1610_119 — tRNA
(tRNA-Phe(gaa))

Talia1610_120 — tRNA
(tRNA-Gln(ttg))

Talia1610_121

Talia1610_122 — tRNA
(tRNA-Gln(ctg))

Talia1610_123 — tRNA
(tRNA-Ser(tga))

Talia1610_124 — tRNA
(tRNA-Ile(gat))

Talia1610_125

Talia1610_126 — tRNA
(tRNA-Glu(ttc))

Talia1610_127 — tRNA
(tRNA-Glu(ctc))

Talia1610_128

Talia1610_129
(Holliday junction resolvase)

Talia1610_130 — tRNA
(tRNA-Ser(tga))

Talia1610_131 — tRNA
(tRNA-Val(tac))

Talia1610_132 — tRNA
(tRNA-Leu(caa))

Talia1610_133 — tRNA
(tRNA-Ile(tat))

Talia1610_134

Talia1610_135 — tRNA
(tRNA-Arg(acg))

Talia1610_136 — tRNA
(tRNA-Ser(gct))

Talia1610_137 — tRNA
(tRNA-Leu(gag))

Talia1610_138

Talia1610_139 — tRNA
(tRNA-Leu(tag))

Talia1610_140 — tRNA
(tRNA-?(Arg|Ala)(cg))

Talia1610_141 — tRNA
(tRNA-Arg(tct))

Talia1610_142 — tRNA
(tRNA-Tyr(gta))

Talia1610_143 — tRNA
(tRNA-Lys(ctt))

Talia1610_144 — tRNA
(tRNA-Lys(ttt))

Talia1610_145

Talia1610_146

Talia1610_147

Talia1610_148

Talia1610_149

Talia1610_150
(endolysin, protease M23 domain)

Talia1610_151
(endolysin, peptidase domain)

Talia1610_152 — tRNA
(tRNA-Met(cat))

Talia1610_153

Talia1610_154
(DnaQ-like (DNA polymerase III subunit))

Talia1610_155

Talia1610_156 — tRNA
(tRNA-Met(cat))

Talia1610_157 — tRNA
(tRNA-Asn(gtt))

Talia1610_158 — tRNA
(tRNA-Ala(tgc))

Talia1610_159

Talia1610_160 — tRNA
(tRNA-Asp(gtc))

Talia1610_161
(RNA ligase)

Talia1610_162 — tRNA
(tRNA-His(gtg))

Talia1610_163
(UDP-glucose dehydrogenase)

Talia1610_164

Talia1610_165

Talia1610_166 — tRNA
(tRNA-Arg(cct))

Talia1610_167 — tRNA
(tRNA-Thr(ggt))

Talia1610_168 — tRNA
(tRNA-Cys(gca))

Talia1610_169
(HNH endonuclease)

Talia1610_170

Talia1610_171
(Mre11 double-strand break endo/exonuclease)

Talia1610_172

Talia1610_173

Talia1610_174
(glycosyltransferase)

Talia1610_175

Talia1610_176

Talia1610_177
(glycosyltransferase)

Talia1610_178
(glycosyltransferase)

Talia1610_179
(nucleotidyl transferase)

Talia1610_180

Talia1610_181
(RNA ligase)

Talia1610_182

Talia1610_183
(polynucleotide kinase)

Talia1610_184

Talia1610_185
(tRNA nucleotidyltransferase)

Talia1610_186
(ASCE ATPase)

Talia1610_187

Talia1610_188

Talia1610_189

Talia1610_190

Talia1610_191
(nucleotidyl transferase)

Talia1610_192

Talia1610_193
(WhiB family transcription factor)

Talia1610_194
(DNA helicase)

Talia1610_195
(DNA primase)

Talia1610_196

Talia1610_197

Talia1610_198
(HNH endonuclease)

Talia1610_199

Talia1610_200
(DNA helicase)

Talia1610_201

Talia1610_202

Talia1610_203

Talia1610_204

Talia1610_205

Talia1610_206

Talia1610_207

Talia1610_208

Talia1610_209
(terminase)

Talia1610_210

Talia1610_211

Talia1610_212

Talia1610_213

Talia1610_214

Talia1610_215
(SprT-like protease)

Talia1610_216

Talia1610_217

Talia1610_218

Talia1610_219

Talia1610_220

Talia1610_221

Talia1610_222

Talia1610_223

Talia1610_224

Talia1610_225

Talia1610_226

Talia1610_227

Talia1610_228

Talia1610_229

Talia1610_230

Talia1610_231

Talia1610_232

Talia1610_233

Talia1610_234

Talia1610_235

Talia1610_236

Talia1610_237

Talia1610_238

Talia1610_239

Talia1610_240

Talia1610_241

Talia1610_242

Talia1610_243

Talia1610_244

Talia1610_245

Talia1610_246

Talia1610_247

Talia1610_248

Talia1610_249

Talia1610_250

Talia1610_251

Talia1610_252
(glycoside hydrolase)

Talia1610_253

Talia1610_254

Talia1610_255

Talia1610_256

Talia1610_257

Talia1610_258

Talia1610_259

Talia1610_260

Talia1610_261

Talia1610_262

Talia1610_263

Talia1610_264

Talia1610_265

Talia1610_266

Talia1610_267

Talia1610_268

Talia1610_269

Talia1610_270

Talia1610_271

Talia1610_272

Talia1610_273

Talia1610_274
(helix-turn-helix DNA binding domain)

Talia1610_275

Talia1610_276

Talia1610_277

Talia1610_278

Talia1610_279

Talia1610_280

Talia1610_281

Talia1610_282

Talia1610_283

Talia1610_284

Talia1610_285

Talia1610_286

Talia1610_287

Talia1610_288

Talia1610_289

Talia1610_290

Talia1610_291

Talia1610_292

Talia1610_293

Talia1610_294

Talia1610_295

Talia1610_296

Talia1610_297

Talia1610_298

Talia1610_299

Talia1610_300

Talia1610_301

Talia1610_302

Talia1610_303

Talia1610_304

Talia1610_305

Talia1610_306

Talia1610_307

Talia1610_308

Talia1610_309

Talia1610_310

Talia1610_311

Talia1610_312

Talia1610_313

Talia1610_314

Talia1610_315

Talia1610_316

Talia1610_317

Talia1610_318

Talia1610_319

Talia1610_320

Talia1610_321

Talia1610_322

Talia1610_323

Talia1610_324

Talia1610_325

Talia1610_326

Talia1610_327

Talia1610_328

Talia1610_329

Talia1610_330
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ559666
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 191
Pitt Freezer Box Grid# E9
Available Files
GenBank File for PhameratorDownload