Detailed Information for Phage Thoth |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Brenden Johnson |
Year Found | 2019 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 40.446665 N, 79.954304 W Map |
Naming Notes | Thoth is the ancient egyptian god of writing, wisdom, and magic. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 20, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2416 |
Genome length (bp) | 64606 |
Character of genome ends | Circularly Permuted |
GC Content | 59.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | D |
Subcluster | D1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 88 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT889385 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
115 |
Pitt Freezer Box Grid# |
H2 |
Available Files |
GenBank File for Phamerator | Download |