Gordonia phage TinaLin
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Detailed Information for Phage TinaLin
Discovery Information
Isolation HostGordonia terrae NRRL B-16283
Found ByTina Hailer, Jarelin Huliganga
Year Found2019
Location FoundReno, NV United States
Finding InstitutionTruckee Meadows Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates39.571297 N, 119.79599 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 10, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1594
Genome length (bp)43366
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceTCCGGGCAGGTA
GC Content65.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCU
SubclusterCU1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionTruckee Meadows Community College
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes73
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

TinaLin_1

TinaLin_2

TinaLin_3

TinaLin_4

TinaLin_5

TinaLin_6

TinaLin_7

TinaLin_8
(serine hydrolase)

TinaLin_9
(terminase small subunit)

TinaLin_10
(terminase large subunit)

TinaLin_11
(portal protein)

TinaLin_12
(capsid maturation protease)

TinaLin_13
(major capsid protein)

TinaLin_14

TinaLin_15
(head-to-tail adaptor)

TinaLin_16
(head-to-tail stopper)

TinaLin_17

TinaLin_18

TinaLin_19
(tail terminator)

TinaLin_20
(major tail protein)

TinaLin_21
(tail assembly chaperone)

TinaLin_22
(tail assembly chaperone)

TinaLin_23
(tape measure protein)

TinaLin_24
(minor tail protein)

TinaLin_25
(minor tail protein)

TinaLin_26
(lysin A)

TinaLin_27

TinaLin_28

TinaLin_29
(minor tail protein)

TinaLin_30
(minor tail protein)

TinaLin_31

TinaLin_32 — tRNA
(tRNA-Lys(ttt))

TinaLin_33
(helix-turn-helix DNA-binding domain protein)

TinaLin_34

TinaLin_35

TinaLin_36
(tyrosine integrase)

TinaLin_37

TinaLin_38
(immunity repressor)

TinaLin_39
(helix-turn-helix DNA-binding domain protein)

TinaLin_40
(helix-turn-helix DNA-binding domain protein)

TinaLin_41

TinaLin_42

TinaLin_43

TinaLin_44
(Cas4 family exonuclease)

TinaLin_45

TinaLin_46
(ERF family ssDNA binding protein)

TinaLin_47

TinaLin_48

TinaLin_49

TinaLin_50
(HNH endonuclease)

TinaLin_51
(helix-turn-helix DNA-binding protein)

TinaLin_52
(DnaB-like dsDNA helicase)

TinaLin_53
(ssDNA binding protein)

TinaLin_54

TinaLin_55

TinaLin_56
(holliday junction resolvase)

TinaLin_57

TinaLin_58

TinaLin_59

TinaLin_60
(helix-turn-helix DNA-binding domain protein)

TinaLin_61

TinaLin_62
(NrdH-like glutaredoxin)

TinaLin_63
(HNH endonuclease)

TinaLin_64

TinaLin_65
(MRE11 double-strand break endo/exonuclease)

TinaLin_66

TinaLin_67

TinaLin_68

TinaLin_69
(nucleoside deoxyribosyltransferase)

TinaLin_70
(ribbon-helix-helix DNA binding domain protein)

TinaLin_71

TinaLin_72

TinaLin_73

TinaLin_74

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW132713
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload