| Detailed Information for Phage Toniann |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Leon Lin |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.435945 N, 79.956106 W Map |
| Discovery Notes | Was found in the lawn of a South Oakland house. Semi-moist dirt, about 5 inches below the surface |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 13, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 878 |
| Genome length (bp) | 92546 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCGACGCTC |
| GC Content | 61.9% |
| Sequencing Notes | Approximately 20% of the population contain a 3281 bp deletion between 40093 - 43373 bp, inclusive
|
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CQ |
| Subcluster | CQ1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | small, clear plaques, approx 1mm in diameter |
| Morphotype | Siphoviridae |
| Number of Genes | 179 |
| Number of tRNAs | 7 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MF919537 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Ignore |
| Available Files |
| GenBank File for Phamerator | Download |