Rhodococcus phage UhSalsa
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Detailed Information for Phage UhSalsa
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Former namesArudococcus
Found ByAlex Muralles/Aru Rajeevan
Year Found2015
Location FoundWest Mifflin, PA USA
Finding InstitutionCarnegie Mellon University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.342222 N, 79.943333 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 24, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3221
Genome length (bp)46539
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
GC Content58.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCarnegie Mellon University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes66
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

UhSalsa_1

UhSalsa_2

UhSalsa_3

UhSalsa_4 — tRNA
(tRNA-Asn(gtt))

UhSalsa_5 — tRNA
(tRNA_Undet (Val/Arg))

UhSalsa_6 — tRNA
(tRNA-Trp(cca))

UhSalsa_7
(endolysin)

UhSalsa_8
(terminase large subunit)

UhSalsa_9
(portal protein)

UhSalsa_10
(capsid maturation protease)

UhSalsa_11
(scaffolding protein)

UhSalsa_12
(major capsid protein)

UhSalsa_13

UhSalsa_14
(head-to-tail adaptor)

UhSalsa_15
(head-to-tail stopper)

UhSalsa_16

UhSalsa_17
(tail terminator)

UhSalsa_18
(major tail protein)

UhSalsa_19
(tail assembly chaperone)

UhSalsa_20
(tail assembly chaperone)

UhSalsa_21
(tape measure protein)

UhSalsa_22
(minor tail protein)

UhSalsa_23
(minor tail protein)

UhSalsa_24
(minor tail protein)

UhSalsa_25
(holin)

UhSalsa_26

UhSalsa_27
(minor tail protein)

UhSalsa_28

UhSalsa_29
(serine integrase)

UhSalsa_30

UhSalsa_31

UhSalsa_32
(deoxycytidylate deaminase)

UhSalsa_33

UhSalsa_34

UhSalsa_35

UhSalsa_36
(DNA polymerase I)

UhSalsa_37
(helix-turn-helix DNA-binding domain protein)

UhSalsa_38
(ThyX-like thymidylate synthase)

UhSalsa_39

UhSalsa_40

UhSalsa_41
(ribonucleotide reductase)

UhSalsa_42

UhSalsa_43
(DNA binding protein)

UhSalsa_44
(metallophosphoesterase)

UhSalsa_45

UhSalsa_46
(glutaredoxin)

UhSalsa_47

UhSalsa_48
(DNA primase)

UhSalsa_49
(DNA primase)

UhSalsa_50

UhSalsa_51
(endonuclease VII)

UhSalsa_52

UhSalsa_53
(DnaB-like dsDNA helicase)

UhSalsa_54

UhSalsa_55

UhSalsa_56
(Cas4 exonuclease)

UhSalsa_57

UhSalsa_58
(immunity repressor)

UhSalsa_59

UhSalsa_60

UhSalsa_61

UhSalsa_62

UhSalsa_63

UhSalsa_64
(ArdA-like antirestriction protein)

UhSalsa_65

UhSalsa_66

UhSalsa_67

UhSalsa_68

UhSalsa_69

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH271319
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.6x10^9 pfu/mL
Date of SEA Lysate Titering Nov 23, 2015
Pitt Freezer Box# 18
Pitt Freezer Box Grid# D3
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload