| Detailed Information for Phage Visconti | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Andrew Peter Visconti |
| Year Found | 2016 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | University of the Sciences (now St. Joseph's Univ) |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.944726 N, 75.205286 W Map |
| Discovery Notes | Obtained at University of the Sciences, in Philadelphia. Found at the back end of the parking lot by dumpsters. 2-3 Feet from trees and a road leading to parking lot. Obtained t 9:30 AM on 9/15/16. Temperature was 66 degrees F. Sample was 1-2 inches from surface, Soil was dry and fine. |
| Naming Notes | My family has a long history with many different backgrounds. The Visconti's have been dukes, they have been generals, they have even been a Pope! ... and now, they are also bacteria phage! |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 87 |
| Genome length (bp) | 64570 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.7% |
| Sequencing Notes | This phage was sequenced as part of a DOGEMS sample, and then was identified by PCR. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | D |
| Subcluster | D1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAdjutor (D1) BigMama (D1) Butterscotch (D1) Chill (D1) Delton (D1) Erk16 (D1) Giuseppe (D1) Gumball (D1) Helpful (D1) KandZ (D1) Mopey (D1) Nova (D1) PBI1 (D1) Penelope2018 (D1) Phalaborwa (D1) PLot (D1) Prager (D1) SirHarley (D1) SuperheroCarly (D1) Thoth (D1) Troll4 (D1) Visconti (D1) WaldoWhy (D1) Hawkeye (D2) |
| Annotating Institution | University of the Sciences (now St. Joseph's Univ) |
| Annotation Status | In GenBank |
| Plaque Notes | The head is around 75 nm in diameter and the tail is around 250 nm in length. |
| Morphotype | Siphoviridae |
| Number of Genes | 89 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewVisconti_1 Visconti_2 Visconti_3 Visconti_4 Visconti_5 Visconti_6 Visconti_7 Visconti_8 Visconti_9 Visconti_10 Visconti_11 Visconti_12 Visconti_13 Visconti_14 Visconti_15 Visconti_16 Visconti_17 Visconti_18 Visconti_19 Visconti_20 Visconti_21 Visconti_22 Visconti_23 Visconti_24 Visconti_25 Visconti_26 Visconti_27 Visconti_28 Visconti_29 Visconti_30 Visconti_31 Visconti_32 Visconti_33 Visconti_34 Visconti_35 Visconti_36 Visconti_37 Visconti_38 Visconti_39 Visconti_40 Visconti_41 Visconti_42 Visconti_43 Visconti_44 Visconti_45 Visconti_46 Visconti_47 Visconti_48 Visconti_49 Visconti_50 Visconti_51 Visconti_52 Visconti_53 Visconti_54 Visconti_55 Visconti_56 Visconti_57 Visconti_58 Visconti_59 Visconti_60 Visconti_61 Visconti_62 Visconti_63 Visconti_64 Visconti_65 Visconti_66 Visconti_67 Visconti_68 Visconti_69 Visconti_70 Visconti_71 Visconti_72 Visconti_73 Visconti_74 Visconti_75 Visconti_76 Visconti_77 Visconti_78 Visconti_79 Visconti_80 Visconti_81 Visconti_82 Visconti_83 Visconti_84 Visconti_85 Visconti_86 Visconti_87 Visconti_88 Visconti_89 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH399788 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 1.83x10^10 pfu/mL |
| Date of SEA Lysate Titering | Oct 25, 2016 |
| Pitt Freezer Box# | 34 |
| Pitt Freezer Box Grid# | G4 |
| Available Files | |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |