| Detailed Information for Phage Visconti | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Andrew Peter Visconti |
| Year Found | 2016 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | University of the Sciences (now St. Joseph's Univ) |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.944726 N, 75.205286 W Map |
| Discovery Notes | Obtained at University of the Sciences, in Philadelphia. Found at the back end of the parking lot by dumpsters. 2-3 Feet from trees and a road leading to parking lot. Obtained t 9:30 AM on 9/15/16. Temperature was 66 degrees F. Sample was 1-2 inches from surface, Soil was dry and fine. |
| Naming Notes | My family has a long history with many different backgrounds. The Visconti's have been dukes, they have been generals, they have even been a Pope! ... and now, they are also bacteria phage! |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 87 |
| Genome length (bp) | 64570 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.7% |
| Sequencing Notes | This phage was sequenced as part of a DOGEMS sample, and then was identified by PCR. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | D |
| Subcluster | D1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of the Sciences (now St. Joseph's Univ) |
| Annotation Status | In GenBank |
| Plaque Notes | The head is around 75 nm in diameter and the tail is around 250 nm in length. |
| Morphotype | Siphoviridae |
| Number of Genes | 89 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewVisconti_1 Visconti_2 Visconti_3 Visconti_4 Visconti_5 Visconti_6 Visconti_7 Visconti_8 Visconti_9 Visconti_10 Visconti_11 Visconti_12 Visconti_13 Visconti_14 Visconti_15 Visconti_16 Visconti_17 Visconti_18 Visconti_19 Visconti_20 Visconti_21 Visconti_22 Visconti_23 Visconti_24 Visconti_25 Visconti_26 Visconti_27 Visconti_28 Visconti_29 Visconti_30 Visconti_31 Visconti_32 Visconti_33 Visconti_34 Visconti_35 Visconti_36 Visconti_37 Visconti_38 Visconti_39 Visconti_40 Visconti_41 Visconti_42 Visconti_43 Visconti_44 Visconti_45 Visconti_46 Visconti_47 Visconti_48 Visconti_49 Visconti_50 Visconti_51 Visconti_52 Visconti_53 Visconti_54 Visconti_55 Visconti_56 Visconti_57 Visconti_58 Visconti_59 Visconti_60 Visconti_61 Visconti_62 Visconti_63 Visconti_64 Visconti_65 Visconti_66 Visconti_67 Visconti_68 Visconti_69 Visconti_70 Visconti_71 Visconti_72 Visconti_73 Visconti_74 Visconti_75 Visconti_76 Visconti_77 Visconti_78 Visconti_79 Visconti_80 Visconti_81 Visconti_82 Visconti_83 Visconti_84 Visconti_85 Visconti_86 Visconti_87 Visconti_88 Visconti_89 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH399788 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 1.83x10^10 pfu/mL |
| Date of SEA Lysate Titering | Oct 25, 2016 |
| Pitt Freezer Box# | 34 |
| Pitt Freezer Box Grid# | G4 |
| Available Files | |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |