Microbacterium phage WaterT
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Detailed Information for Phage WaterT
Discovery Information
Isolation HostMicrobacterium paraoxydans NRRL B-14843
Duplicates of this PhageBirdie
Found ByBrett Norton
Year Found2018
Location FoundCedar, MN USA
Finding InstitutionUniversity of Wisconsin-River Falls
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates45.3125 N, 93.2567 W Map
Discovery NotesSample was from an old mound of black dirt under a tree. Soil was damp, dark, and compact.
Naming NotesNamed after a character on one of my favorite show, Rick and Morty
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 18, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1778
Genome length (bp)61090
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length1545 bp
GC Content58.2%
Sequencing NotesReads and draft sequence were run through PAUSE. There was a clear double-coverage region, and the right side of it had a well-defined end with a large buildup of reads. The left end, however, did not a have a clear single base where it ended, so the left end was chosen based on the approximate spot where the coverage dropped off.
Fasta file available?Yes: Download fasta file
Characterization
ClusterGB
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Wisconsin-River Falls
Annotation StatusIn GenBank
Plaque Notesplaques were clear with halos
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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WaterT_1

WaterT_2

WaterT_3

WaterT_4

WaterT_5

WaterT_6

WaterT_7

WaterT_8

WaterT_9
(ParB-like nuclease domain protein)

WaterT_10

WaterT_11

WaterT_12

WaterT_13

WaterT_14

WaterT_15
(protease)

WaterT_16

WaterT_17

WaterT_18

WaterT_19

WaterT_20

WaterT_21

WaterT_22
(terminase)

WaterT_23
(portal protein)

WaterT_24
(capsid maturation protease)

WaterT_25

WaterT_26
(major capsid protein)

WaterT_27
(G-I-Y Y-I-G endonuclease)

WaterT_28
(minor tail protein)

WaterT_29

WaterT_30

WaterT_31
(glycosylhydrolase)

WaterT_32

WaterT_33

WaterT_34

WaterT_35

WaterT_36
(tail terminator)

WaterT_37

WaterT_38

WaterT_39
(minor tail protein)

WaterT_40
(tail assembly chaperone)

WaterT_41
(tail assembly chaperone)

WaterT_42
(tape measure protein)

WaterT_43
(minor tail protein)

WaterT_44
(minor tail protein)

WaterT_45
(minor tail protein)

WaterT_46

WaterT_47

WaterT_48
(endolysin)

WaterT_49

WaterT_50
(exonuclease)

WaterT_51

WaterT_52
(NrdH-like glutaredoxin)

WaterT_53

WaterT_54

WaterT_55

WaterT_56

WaterT_57

WaterT_58
(RuvC-like resolvase)

WaterT_59

WaterT_60

WaterT_61

WaterT_62

WaterT_63

WaterT_64
(DNA polymerase I)

WaterT_65

WaterT_66

WaterT_67

WaterT_68
(DNA primase/polymerase)

WaterT_69

WaterT_71

WaterT_72
(ssDNA binding protein)

WaterT_73

WaterT_74

WaterT_75
(Cas4 family exonuclease)

WaterT_76

WaterT_77

WaterT_78
(ssDNA binding protein)

WaterT_79

WaterT_80
(DnaQ-like DNA polymerase III subunit)

WaterT_81

WaterT_82

WaterT_83

WaterT_84
(WhiB family transcription factor)

WaterT_85

WaterT_86

WaterT_87

WaterT_88

WaterT_89

WaterT_90
(DNA helicase)

WaterT_91

WaterT_92

WaterT_93

WaterT_94

WaterT_95

WaterT_96

WaterT_97

WaterT_98

WaterT_99

WaterT_100

WaterT_101

WaterT_102

WaterT_103

WaterT_104

WaterT_105

WaterT_106

WaterT_107

WaterT_108

WaterT_109

WaterT_110

WaterT_111

WaterT_112

WaterT_113

WaterT_114

WaterT_115

WaterT_116

WaterT_117

WaterT_118

WaterT_119

WaterT_120

WaterT_121

WaterT_122

WaterT_123

WaterT_124

WaterT_125

WaterT_126

WaterT_127

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN096357
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 88
Pitt Freezer Box Grid# B6
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload