Gordonia phage CloverMinnie
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Detailed Information for Phage CloverMinnie
Discovery Information
Isolation HostGordonia terrae 3612
Duplicates of this PhageCloverMickie, Explosive
Found ByKerry Iles
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.262021 N, 79.565175 W Map
Discovery NotesThis phage was isolated from the plant Impatiens pallida, collected by Elizabeth O'Neill. The plant was washed with PYCa, filtered, and then enriched with host at 30 degrees Celsius.
Naming NotesImpatiens pallida is a white clover.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 23, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1189
Genome length (bp)61098
Character of genome endsCircularly Permuted
GC Content68.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDR
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesPlaques are clear and 1-2 mm in diameter.
Number of Genes84
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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CloverMinnie_1
(ParB-like nuclease domain protein)

CloverMinnie_2
(oxidoreductase)

CloverMinnie_3

CloverMinnie_4
(adenylate kinase)

CloverMinnie_5

CloverMinnie_6
(terminase)

CloverMinnie_7

CloverMinnie_8
(RuvC-like resolvase)

CloverMinnie_9

CloverMinnie_10
(portal protein)

CloverMinnie_11
(capsid maturation protease and MuF-like fusion protein)

CloverMinnie_12

CloverMinnie_13
(major capsid hexamer protein)

CloverMinnie_14
(major capsid pentamer protein)

CloverMinnie_15

CloverMinnie_16

CloverMinnie_17

CloverMinnie_18

CloverMinnie_19

CloverMinnie_20
(major tail protein)

CloverMinnie_21
(head-to-tail adaptor)

CloverMinnie_22

CloverMinnie_23

CloverMinnie_24
(tail assembly chaperone)

CloverMinnie_25
(tail assembly chaperone)

CloverMinnie_26
(tape measure protein)

CloverMinnie_27
(minor tail protein)

CloverMinnie_28
(minor tail protein)

CloverMinnie_29
(minor tail protein)

CloverMinnie_30

CloverMinnie_31

CloverMinnie_32

CloverMinnie_33

CloverMinnie_34

CloverMinnie_35

CloverMinnie_36

CloverMinnie_37

CloverMinnie_38

CloverMinnie_39

CloverMinnie_40
(LamD-like protein)

CloverMinnie_41
(LamD-like protein)

CloverMinnie_42

CloverMinnie_43
(lysin A, L-Ala-D-Glu peptidase domain)

CloverMinnie_44
(lysin A, glycosyl hydrolase domain)

CloverMinnie_45
(lysin B)

CloverMinnie_46

CloverMinnie_47
(exonuclease)

CloverMinnie_48
(DNA helicase)

CloverMinnie_49

CloverMinnie_50

CloverMinnie_51
(DNA primase/helicase)

CloverMinnie_52

CloverMinnie_53
(DNA polymerase I)

CloverMinnie_54

CloverMinnie_55

CloverMinnie_56

CloverMinnie_57

CloverMinnie_58

CloverMinnie_59
(phosphatase)

CloverMinnie_60

CloverMinnie_61
(ribbon-helix-helix DNA binding domain protein)

CloverMinnie_62

CloverMinnie_63

CloverMinnie_64

CloverMinnie_65

CloverMinnie_66

CloverMinnie_67

CloverMinnie_68

CloverMinnie_69

CloverMinnie_70

CloverMinnie_71

CloverMinnie_72
(DNA binding protein)

CloverMinnie_73

CloverMinnie_74

CloverMinnie_75

CloverMinnie_76
(HNH endonuclease)

CloverMinnie_77

CloverMinnie_78

CloverMinnie_79

CloverMinnie_80

CloverMinnie_81

CloverMinnie_82

CloverMinnie_83

CloverMinnie_84

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234196
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 6
Pitt Freezer Box Grid# C12
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload