Detailed Information for Phage CloverMinnie |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Duplicates of this Phage | CloverMickie, Explosive |
Found By | Kerry Iles |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 40.262021 N, 79.565175 W Map |
Discovery Notes | This phage was isolated from the plant Impatiens pallida, collected by Elizabeth O'Neill. The plant was washed with PYCa, filtered, and then enriched with host at 30 degrees Celsius. |
Naming Notes | Impatiens pallida is a white clover. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 23, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1189 |
Genome length (bp) | 61098 |
Character of genome ends | Circularly Permuted |
GC Content | 68.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DR |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Plaques are clear and 1-2 mm in diameter. |
Number of Genes | 84 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN234196 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
6 |
Pitt Freezer Box Grid# |
C12 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |