Gordonia phage EMsquaredA
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Detailed Information for Phage EMsquaredA
Discovery Information
Isolation HostGordonia terrae 3612
Former namesEM2A
Found ByEmmanuella Lafortune
Year Found2017
Location FoundNyack, NY USA
Finding InstitutionAlliance University (formerly Nyack College)
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.0915 N, 73.9205 W Map
Naming NotesEM2A, it can aslo pronounce as EMMA and EMMA comes from my full name Emmanuella and because there are two Ms and Ls, instead of writing my full name, I sometime put, a 2 which mean square. M2 (square).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 19, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage697
Genome length (bp)50531
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGTATGGCAT
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCY
SubclusterCY1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionAlliance University (formerly Nyack College)
Annotation StatusIn GenBank
Plaque Notesthe plaque seem to be foggy but it is clear enough to see, how many plaques on it. because the plate was in the fridge for a while, there is an orange-ish color on the plate.
Number of Genes80
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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EMsquaredA_1
(terminase small subunit)

EMsquaredA_2
(terminase large subunit)

EMsquaredA_3
(portal protein)

EMsquaredA_4
(MuF-like minor capsid protein)

EMsquaredA_5
(scaffolding protein)

EMsquaredA_6
(LamD-like capsid decoration protein)

EMsquaredA_7
(major capsid protein)

EMsquaredA_8

EMsquaredA_9
(head-to-tail adaptor)

EMsquaredA_10
(head-to-tail stopper)

EMsquaredA_11

EMsquaredA_12

EMsquaredA_13
(tail terminator)

EMsquaredA_14
(major tail protein)

EMsquaredA_15
(tail assembly chaperone)

EMsquaredA_16
(tail assembly chaperone)

EMsquaredA_17

EMsquaredA_18
(tape measure protein)

EMsquaredA_19
(minor tail protein)

EMsquaredA_20
(minor tail protein)

EMsquaredA_21

EMsquaredA_22
(lysin A)

EMsquaredA_23
(holin)

EMsquaredA_24

EMsquaredA_25

EMsquaredA_26

EMsquaredA_27
(lysin B)

EMsquaredA_28

EMsquaredA_29
(minor tail protein)

EMsquaredA_30
(minor tail protein)

EMsquaredA_31

EMsquaredA_32

EMsquaredA_33

EMsquaredA_34

EMsquaredA_35

EMsquaredA_36
(tyrosine integrase)

EMsquaredA_37
(tyrosine integrase)

EMsquaredA_38
(helix-turn-helix DNA binding protein)

EMsquaredA_39
(metalloprotease)

EMsquaredA_40

EMsquaredA_41
(serine/threonine kinase)

EMsquaredA_42

EMsquaredA_43

EMsquaredA_44
(excise)

EMsquaredA_45

EMsquaredA_46

EMsquaredA_47

EMsquaredA_48
(excise)

EMsquaredA_49

EMsquaredA_50

EMsquaredA_51

EMsquaredA_52

EMsquaredA_53

EMsquaredA_54
(DnaQ-like DNA polymerase III subunit)

EMsquaredA_55

EMsquaredA_56
(DNA helicase)

EMsquaredA_57
(RecT-like ssDNA binding protein)

EMsquaredA_58

EMsquaredA_59

EMsquaredA_60

EMsquaredA_61

EMsquaredA_62

EMsquaredA_63
(HNH endonuclease)

EMsquaredA_64
(DNA methylase)

EMsquaredA_65

EMsquaredA_66

EMsquaredA_67

EMsquaredA_68
(ADP-ribosyltransferase)

EMsquaredA_69

EMsquaredA_70

EMsquaredA_71

EMsquaredA_72

EMsquaredA_73
(RusA-like resolvase)

EMsquaredA_74

EMsquaredA_75

EMsquaredA_76

EMsquaredA_77
(helix-turn-helix DNA binding protein)

EMsquaredA_78

EMsquaredA_79

EMsquaredA_80
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK433275
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 71
Pitt Freezer Box Grid# H4
Available Files
GenBank File for PhameratorDownload