Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Truman Chong |
Year Found | 2023 |
Location Found | Sawtelle, CA USA |
Finding Institution | University of California, Los Angeles |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 34.0403 N, 118.44485 W Map |
Discovery Notes | Moist soil collected in a suburban collection site. Notes, Collected by a tree by a sidewalk by residential housing with heavy foot traffic.
S23-1B: Instructor: Dr. Tejas Bouklas Teaching Assistant: Michelle Zorawik Undergraduate Assistant(s): Clarice Chui, Sophia Sibal Pulido
Team #1 Name: Phushigi Team #1 Members: Rodia Liu, and Truman Chong
Team #2 Name: Women in Plaque Team #2 Members: Sasha Anand, Tarissa Almeida, Uyen Trinh, Arieanne De Guzman
Team #3 Name: Plaque Sabbath Team #3 Members: Khushi Bhatt, Sebastian Castellanos, Edwin Liang, and Alicia Sanoyca |
Naming Notes | Our group name was Phushigi as in the Fushigi Gravity Ball from the early 2010s. Therefore, it was only fitting for the phage we isolated to be named GravityBall. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 6, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2449 |
Genome length (bp) | 51100 |
Character of genome ends | Circularly Permuted |
GC Content | 60.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AO |
Subcluster | AO2 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of California, Los Angeles |
Annotation Status | QC Complete |
Plaque Notes | The plaques made by this phage are clear and circular with jagged edges. |
Morphotype | Myoviridae |
Number of Genes | 78 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
184 |
Pitt Freezer Box Grid# |
D10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |