Gordonia phage Hanem
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| Detailed Information for Phage Hanem | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Sophia Vining |
| Year Found | 2019 |
| Location Found | Fairfax, VA USA |
| Finding Institution | George Mason University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 22°C |
| GPS Coordinates | 38.831389 N, 77.358611 W Map |
| Discovery Notes | The sample was collected from a wet, organic/well fertilized, topsoil location. The sample was collected at 7:31 am. |
| Naming Notes | I named my phage Hanem after my grandmother. Its an Arabic name that means Lady. My grandmother was always hard to impress, so the name was perfect for my phage. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 12, 2022 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 292 |
| Genome length (bp) | 88511 |
| Character of genome ends | Circularly Permuted |
| GC Content | 60.3% |
| Sequencing Notes | There was one SNP in the population that was sequenced. At position 51653, about 40% of the reads had an A instead of the consensus G. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | George Mason University |
| Annotation Status | In GenBank |
| Plaque Notes | Very small plaques |
| Morphotype | Myoviridae |
| Number of Genes | 126 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OP867024 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 103 |
| Pitt Freezer Box Grid# | C4 |
| Available Files | |
| GenBank File for Phamerator | Download |