| Detailed Information for Phage Kumquat | |
| Discovery Information | |
| Isolation Host | Streptomyces lividans JI 1326 |
| Found By | Bridget Chung and Douglas Thibodeaux |
| Year Found | 2022 |
| Location Found | St. Louis, MO United States |
| Finding Institution | Washington University in St. Louis |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.645656 N, 90.311534 W Map |
| Discovery Notes | Surface level Soil is damp, dark, also is pretty much compost, with debris in it 66 degrees Fahrenheit |
| Naming Notes | The soil was obtained from the gardening club called The Burning Kumquat and so the phage will be named Kumquat. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 16, 2023 |
| Sequencing Facility | The McDonnell Genome Institute at Washington University |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 415 |
| Genome length (bp) | 44847 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 264 bp |
| GC Content | 60.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BF |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Washington University in St. Louis |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques were small to medium sized and irregularly shaped. They had cloudy edges and clear centers. |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewKumquat_1 Kumquat_2 Kumquat_3 Kumquat_4 Kumquat_5 Kumquat_6 Kumquat_7 Kumquat_8 Kumquat_9 Kumquat_10 Kumquat_11 Kumquat_12 Kumquat_13 Kumquat_35 Kumquat_36 Kumquat_37 Kumquat_38 Kumquat_39 Kumquat_40 Kumquat_41 Kumquat_42 Kumquat_43 Kumquat_44 Kumquat_45 Kumquat_46 Kumquat_47 Kumquat_48 Kumquat_49 Kumquat_50 Kumquat_51 Kumquat_52 Kumquat_53 Kumquat_54 Kumquat_55 Kumquat_56 Kumquat_57 Kumquat_58 Kumquat_59 Kumquat_60 Kumquat_61 Kumquat_62 Kumquat_63 Kumquat_65 Kumquat_66 Kumquat_67 Kumquat_68 Kumquat_69 Kumquat_70 Kumquat_71 Kumquat_72 Kumquat_73 Kumquat_74 Kumquat_75 Kumquat_76 Kumquat_77 Kumquat_78 Kumquat_79 Kumquat_80 Kumquat_81 Kumquat_82 Kumquat_83 Kumquat_84 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OR193800 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
